Table 3.
Summary | Control | 1 h | 5 h | 24 h | |
---|---|---|---|---|---|
Raw data | Total | 4,755,703 | 4,867,906 | 4,600,240 | 4,886,350 |
Raw data | Distinct tag | 559,286 | 787,594 | 729,441 | 563,310 |
Clean tag | Total number | 4,362,459 | 4,395,028 | 4,198,701 | 4,491,953 |
Clean tag | Distinct tag number | 175,356 | 323,724 | 334,730 | 178,601 |
All tag mapping to gene | Total number | 1,914,702 | 1,580,825 | 1,327,437 | 2,008,977 |
All tag mapping to gene | Total % of clean tag | 43.89% | 35.97% | 31.62% | 44.72% |
All tag mapping to gene | Distinct tag number | 51,341 | 41,139 | 57,996 | 49,116 |
All tag mapping to genee | Distinct tag % of clean tag | 29.28% | 12.71% | 17.33% | 27.50% |
Unambiguous tag mapping to gene | Total number | 1,906,521 | 1,569,945 | 1,315,834 | 2,001,497 |
Unambiguous tag mapping to gene | Total % of clean tag | 43.70% | 35.72% | 31.34% | 44.56% |
Unambiguous tag mapping to gene | Distinct Tag number | 51,026 | 40,805 | 57,541 | 48,784 |
Unambiguous tag mapping to gene | Distinct Tag % of clean tag | 29.10% | 12.60% | 17.19% | 27.31% |
All tag-mapped genes | number | 19,417 | 17,817 | 21,352 | 19,376 |
All tag-mapped genes | % of ref genes | 43.75% | 40.14% | 48.11% | 43.66% |
Unambiguous tag-mapped Genes | number | 19,287 | 17,674 | 21,195 | 19,217 |
Unambiguous tag-mapped Genes | % of ref genes | 43.46% | 39.82% | 47.76% | 43.30% |
Unknown tag | Total number | 2,447,757 | 2,814,203 | 2,871,264 | 2,482,976 |
Unknown tag | Total % of clean tag | 56.11% | 64.03% | 68.38% | 55.28% |
Unknown tag | Distinct Tag number | 124,015 | 282,585 | 276,734 | 129,485 |
Unknown tag | Distinct Tag % of clean tag | 70.72% | 87.29% | 82.67% | 72.50% |