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. 2013 Nov 28;14(1):838. doi: 10.1186/1471-2164-14-838

Table 1.

Categories that were significantly enriched (p-value below 0.01) based on the physiological function of the genes whose elimination increases the susceptibility to acetic acid

Category p-value Number of genes in the dataset Number of genes in the category
Biological Process
 Mitochondrial translation [GO:0032543] 1.83E-09 23 88
 Translation [GO:0006412] 4.51E-06 41 318
 ATP hydrolysis coupled proton transport [GO:0015991] 3.76E-05 7 17
 Regulation of SNARE complex assembly [GO:0035542] 1.97E-04 4 6
 Ion transport [GO:0006811] 2.75E-04 17 107
 Protein N-linked glycosylation [GO:0006487] 7.11E-04 8 33
 Proton transport [GO:0015992] 7.28E-04 9 41
 Protein lipoylation [GO:0009249] 9.01E-04 3 4
 Golgi to endosome transport [GO:0006895] 1.12E-03 5 14
 Protein complex assembly [GO:0.001261] 1.26E-03 7 28
 Proteolysis [GO:0006508] 1.79E-03 12 74
 Mitochondrial translational initiation [GO:0070124] 2.15E-03 3 5
 Positive regulation of gluconeogenesis [GO:0045722] 2.15E-03 3 5
 Group I intron splicing [GO:0000372] 2.26E-03 4 10
 Deoxyribonucleotide biosynthetic process [GO:0009263] 4.10E-03 3 6
 Vacuolar acidification [GO:0007035] 4.33E-03 6 26
 Positive regulation of mitochondrial translation [GO:0070131] 4.82E-03 4 12
 tRNA aminoacylation for protein translation [GO:0006418] 4.92E-03 7 35
 Regulation of vacuole fusion. non-autophagic [GO:0032889] 6.62E-03 4 13
 Positive regulation of transcription from RNA polymerase II promoter [GO:0045944] 8.37E-03 13 100
 Mitochondrial respiratory chain complex IV assembly [GO:0033617] 8.83E-03 4 14
Cellular Component
 Mitochondrion [GO:0005739] 2.42E-11 118 1072
 Mitochondrial large ribosomal subunit [GO:0005762] 1.79E-08 15 43
 Mitochondrial ribosome [GO:0005761] 3.90E-06 6 9
 alpha-1.6-mannosyltransferase complex [GO:0000136] 5.07E-06 5 6
 CORVET complex [GO:0033263] 5.07E-06 5 6
 Mitochondrial inner membrane [GO:0005743] 1.31E-04 27 204
 Ribosome [GO:0005840] 1.64E-04 36 310
 HOPS complex [GO:0030897] 1.97E-04 4 6
 Proton-transporting two-sector ATPase complex, catalytic domain [GO:0033178] 4.37E-04 4 7
 Ribonucleoside-diphosphate reductase complex [GO:0005971] 9.01E-04 3 4
 Mitochondrial matrix [GO:0005759] 1.23E-03 16 111
 Large ribosomal subunit [GO:0015934] 2.20E-03 5 16
 Ribonucleoprotein complex [GO:0030529] 2.38E-03 32 307
 Transcriptional repressor complex [GO:0017053] 3.83E-03 2 2
 Mitochondrial proton-transporting ATP synthase, catalytic core [GO:0005754] 3.83E-03 2 2
 SPOTS complex (serine palmitoyltransferase) [GO:0035339] 4.10E-03 3 6
 Extrinsic to mitochondrial inner membrane [GO:0031314] 5.01E-03 5 19