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Differential expression analysis of all transcripts in the control (c1d) and ABA-treatment (a1d) libraries. Transcripts that differed by less than 20% (|log2FC| < 0.25) were assumed to not change in expression level. Transcripts that satisfied the conditions of “FDR < 0.05” and “|log2 fold-change (log2FC)| ≥1” were considered significantly differentially-expressed genes (DEGs). Other transcripts are noted as “up-regulated slightly” or “down-regulated slightly”.
