TABLE 1.
Pattern no. | MIRU-VNTR pattern at locus
|
No. of isolates | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2 | 4a | 10 | 16 | 20 | 23 | 24 | 26 | 27 | 31 | 39 | 40 | ||
1 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 1 | 1 | 3 | 4 | 1 |
2 | 2 | 7 | 4 | 3 | 2 | 6 | 2 | 2 | 2 | 1 | 4 | 4 | 1 |
3 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 2 | 3 | 4 | 1 |
4 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 3 | 4 | 2 |
5 | 2 | 5 | 4 | 3 | 2 | 7 | 2 | 2 | 3 | 4 | 3 | 4 | 1 |
6 | 2 | 7 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 3 | 4 | 1 |
7 | 2 | 3 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 3 | 4 | 1 |
8 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 4 | 4 | 1 |
9 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 5 | 4 | 4 | 1 |
10 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 5 | 1 | 4 | 1 |
11 | 2 | 5 | 4 | 1 | 2 | 6 | 2 | 2 | 3 | 5 | 3 | 4 | 1 |
12 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 2 | 3 | 2 | 1 |
13 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 3 | 2 | 10 |
14 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 3 | 1 | 2 |
15 | 2 | 4 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 3 | 1 | 1 |
16 | 2 | 5′ | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 2 | 2 | 1 |
17 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 2 | 2 | 3 |
18 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 1 | 4 | 2 | 2 | 1 |
19 | 2 | 5 | 4 | 1 | 2 | 6 | 2 | 2 | 3 | 4 | 2 | 2 | 1 |
20 | 2 | 5 | 4 | 2 | 2 | 6 | 2 | 2 | 3 | 4 | 2 | 5 | 1 |
21 | 2 | 5 | 4 | 3 | 2 | 2 | 2 | 2 | 3 | 4 | 1 | 2 | 1 |
22 | 2 | 5 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 1 | 2 | 1 |
23 | 2 | 5 | 4 | 3 | 2 | 1 | 2 | 2 | 3 | 4 | 1 | 4 | 1 |
24 | 2 | 0 | 4 | 3 | 2 | 6 | 2 | 2 | 2 | 4 | 3 | 2 | 1 |
25 | 2 | 0 | 4 | 3 | 1 | 6 | 2 | 2 | 3 | 4 | 3 | 2 | 1 |
26 | 2 | 0 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 4 | 3 | 2 | 1 |
27 | 2 | 0 | 4 | 3 | 2 | 6 | 2 | 2 | 3 | 5 | 3 | 2 | 1 |
28 | 2 | 4 | 4 | 3 | 2 | 6 | 2 | 2 | 1 | 5 | 3 | 2 | 1 |
29 | 2 | 6 | 4 | 3 | 2 | 6 | 2 | 2 | 4 | 6 | 3 | 5 | 1 |
30 | 2 | 7 | 4 | 2 | 2 | 4 | 2 | 2 | 3 | 4 | 3 | 4 | 1 |
31 | 2 | 2 | 4 | 2 | 2 | 6 | 2 | 2 | 3 | 4 | 3 | 2 | 1 |
32 | 2 | 5 | 4 | 3 | 2 | 4 | 2 | 7 | 3 | 4 | 3 | 2 | 1 |
33 | 2 | 5 | 5 | 3 | 2 | 6 | 2 | 5 | 3 | 4 | 3 | 2 | 1 |
34 | 2 | 2 | 4 | 3 | 2 | 4 | 2 | 2 | 3 | 4 | 2 | 2 | 1 |
35 | 2 | 5 | 4 | 3 | 2 | 4 | 2 | 2 | 3 | 4 | 2 | 2 | 1 |
36 | 2 | 5 | 4 | 3 | 2 | 4 | 2 | 2 | 3 | 5 | 2 | 2 | 1 |
37 | 2 | 0 | 4 | 3 | 2 | 4 | 2 | 2 | 3 | 5 | 2 | 2 | 1 |
38 | 2 | 5 | 4 | 3 | 1 | 12 | 2 | 2 | 3 | 4 | 2 | 3 | 1 |
39 | 2 | 5 | 4 | 3 | 2 | 4 | 2 | 2 | 3 | 5 | 2 | 3 | 1 |
40 | 2 | 5 | 4 | 3 | 2 | 10 | 2 | 2 | 3 | 3 | 3 | 3 | 1 |
41 | 2 | 5 | 4 | 3 | 2 | 3 | 2 | 2 | 3 | 5 | 3 | 3 | 1 |
42 | 2 | 1′ | 4 | 3 | 2 | 4 | 2 | 2 | 3 | 5 | 3 | 3 | 1 |
43 | 2 | 0 | 4 | 3 | 2 | 1 | 2 | 2 | 3 | 5 | 1 | 3 | 1 |
44 | 2 | 5 | 3 | 3 | 2 | 4 | 2 | 2 | 3 | 6 | 3 | 3 | 1 |
45 | 2 | 5 | 4 | 2 | 2 | 5 | 3 | 2 | 3 | 2 | 3 | 3 | 1 |
46 | 2 | 5 | 4 | 2 | 2 | 5 | 2 | 2 | 3 | 5 | 3 | 3 | 1 |
47 | 3 | 0 | 4 | 2 | 2 | 5 | 2 | 2 | 3 | 4 | 3 | 3 | 1 |
48 | 3 | 2 | 4 | 2 | 2 | 5 | 2 | 2 | 3 | 5 | 3 | 3 | 1 |
49 | 2 | 0 | 4 | 2 | 1 | 5 | 2 | 2 | 3 | 5 | 3 | 2 | 1 |
50 | 2 | 6 | 4 | 2 | 2 | 5 | 2 | 2 | 3 | 5 | 2 | 3 | 2 |
51 | 2 | 5 | 6 | 3 | 2 | 6 | 2 | 7 | 3 | 5 | 1 | 3 | 1 |
52 | 2 | 6 | 5 | 1 | 2 | 5 | 1 | 2 | 3 | 5 | 3 | 3 | 1 |
53 | 2 | 6 | 4 | 1 | 2 | 5 | 1 | 2 | 3 | 5 | 3 | 3 | 1 |
54 | 2 | 2 | 4 | 1 | 2 | 5 | 1 | 2 | 3 | 5 | 3 | 3 | 1 |
55 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 2 | 3 | 5 | 3 | 3 | 2 |
56 | 2 | 0 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 3 | 1 |
57 | 2 | 0 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 2 | 3 | 1 |
58 | 2 | 0 | 3 | 3 | 2 | 5 | 1 | 10 | 3 | 5 | 3 | 3 | 1 |
59 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 6 | 3 | 5 | 3 | 3 | 11 |
60 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 6 | 2 | 5 | 3 | 3 | 1 |
61 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 6 | 3 | 5 | 3 | 4 | 1 |
62 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 5 | 3 | 5 | 3 | 3 | 2 |
63 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 8 | 3 | 5 | 3 | 3 | 4 |
64 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 1 | 3 | 5 | 3 | 3 | 1 |
65 | 2 | 2 | 3 | 3 | 1 | 5 | 1 | 7 | 3 | 3 | 3 | 3 | 1 |
66 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 6 | 3 | 3 | 2 |
67 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 4 | 3 | 3 | 5 |
68 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 4 | 3 | 4 | 3 | 3 | 2 |
69 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 5 | 3 | 4 | 3 | 3 | 1 |
70 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 5 | 3 | 4 | 3 | 4 | 1 |
71 | 2 | 2 | 7 | 4 | 2 | 5 | 1 | 1 | 3 | 4 | 3 | 4 | 1 |
72 | 2 | 2 | 2 | 4 | 2 | 5 | 1 | 1 | 3 | 4 | 3 | 4 | 1 |
73 | 2 | 2 | 3 | 3 | 2 | 9 | 1 | 1 | 3 | 4 | 3 | 3 | 1 |
74 | 2 | 2 | 7 | 2 | 2 | 5 | 1 | 7 | 3 | 4 | 3 | 3 | 3 |
75 | 2 | 2 | 7 | 2 | 2 | 5 | 1 | 7 | 3 | 4 | 3 | 4 | 1 |
76 | 2 | 2 | 6 | 2 | 2 | 5 | 1 | 7 | 3 | 4 | 3 | 3 | 1 |
77 | 2 | 2 | 5 | 2 | 2 | 5 | 1 | 7 | 3 | 4 | 3 | 3 | 2 |
78 | 2 | 2 | 5 | 2 | 2 | 5 | 1 | 7 | 3 | 4 | 2 | 3 | 1 |
79 | 2 | 2 | 8 | 2 | 2 | 5 | 1 | 7 | 3 | 4 | 4 | 3 | 1 |
80 | 2 | 3′ | 8 | 2 | 2 | 1 | 1 | 7 | 3 | 4 | 4 | 3 | 1 |
81 | 2 | 2 | 8 | 2 | 2 | 5 | 1 | 7 | 3 | 4 | 2 | 2 | 1 |
82 | 2 | 2 | 3 | 2 | 2 | 5 | 1 | 7 | 3 | 4 | 3 | 3 | 1 |
83 | 2 | 2 | 5 | 2 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 3 | 1 |
84 | 2 | 2 | 3 | 2 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 3 | 2 |
85 | 2 | 2 | 3 | 2 | 2 | 5 | 1 | 5 | 1 | 5 | 3 | 3 | 2 |
86 | 2 | 2 | 3 | 4 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 3 | 1 |
87 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 3 | 39 |
88 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 3 | 6 |
89 | 2 | 2 | 1 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 3 | 1 |
90 | 2 | 2 | 1 | 3 | 2 | 7 | 1 | 7 | 3 | 5 | 3 | 4 | 1 |
91 | 2 | 2 | 3 | 3 | 2 | 6 | 1 | 7 | 3 | 5 | 3 | 3 | 2 |
92 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 3 | 3 | 1 | 1 |
93 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 6 | 3 | 1 | 1 |
94 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 1 | 5 | 3 | 1 | 3 |
95 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 7 | 1 | 5 | 4 | 1 | 1 |
96 | 2 | 3 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 2 | 1 |
97 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 3 | 2 | 5 |
98 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 2 | 3 | 5 | 2 | 2 | 1 |
99 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 2 | 2 | 1 |
100 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 6 | 3 | 5 | 3 | 2 | 2 |
101 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 8 | 3 | 5 | 3 | 2 | 1 |
102 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 4 | 3 | 2 |
103 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 5 | 3 | 1 |
104 | 2 | 4 | 3 | 3 | 2 | 5 | 1 | 6 | 3 | 2 | 1 | 3 | 1 |
105 | 2 | 2 | 3 | 3 | 2 | 2 | 1 | 7 | 3 | 2 | 1 | 3 | 1 |
106 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 6 | 3 | 5 | 1 | 3 | 1 |
107 | 2 | 2 | 3 | 3 | 2 | 1 | 1 | 7 | 3 | 5 | 1 | 3 | 1 |
108 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 1 | 3 | 2 |
109 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 1 | 2 | 3 | 1 |
110 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 2 | 2 | 1 | 1 |
111 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 2 | 2 | 3 | 1 |
112 | 2 | 2 | 3 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 2 | 3 | 7 |
113 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 7 | 3 | 3 | 4 | 3 | 1 |
114 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 5 | 3 | 3 | 4 | 3 | 2 |
115 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 9 | 3 | 5 | 4 | 3 | 2 |
116 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 6 | 3 | 5 | 4 | 3 | 1 |
117 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 4 | 3 | 16 |
118 | 2 | 2 | 2 | 2 | 2 | 5 | 1 | 7 | 3 | 5 | 4 | 3 | 1 |
119 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 7 | 3 | 5 | 2 | 3 | 2 |
120 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 4 | 3 | 2 | 2 | 3 | 1 |
121 | 2 | 2 | 5 | 3 | 2 | 5 | 1 | 4 | 3 | 5 | 2 | 3 | 1 |
122 | 2 | 2 | 5 | 1 | 2 | 5 | 1 | 1 | 3 | 1 | 2 | 2 | 1 |
123 | 2 | 2 | 5 | 1 | 2 | 5 | 1 | 1 | 1 | 2 | 2 | 2 | 1 |
124 | 2 | 2 | 5 | 1 | 2 | 5 | 1 | 1 | 3 | 3 | 2 | 2 | 2 |
125 | 2 | 2 | 2 | 1 | 2 | 5 | 1 | 1 | 3 | 3 | 2 | 2 | 1 |
126 | 2 | 2 | 7 | 2 | 2 | 5 | 1 | 1 | 3 | 3 | 2 | 2 | 1 |
127 | 2 | 2 | 2 | 2 | 2 | 5 | 1 | 1 | 3 | 3 | 2 | 2 | 1 |
128 | 2 | 2 | 2 | 2 | 2 | 5 | 1 | 5 | 3 | 3 | 2 | 2 | 1 |
129 | 2 | 2 | 6 | 4 | 2 | 3 | 1 | 5 | 3 | 3 | 2 | 4 | 1 |
130 | 2 | 2 | 2 | 4 | 2 | 6 | 1 | 5 | 3 | 3 | 2 | 2 | 1 |
131 | 2 | 2 | 2 | 4 | 2 | 5 | 1 | 4 | 3 | 3 | 2 | 4 | 1 |
132 | 2 | 2 | 2 | 4 | 2 | 5 | 1 | 6 | 3 | 3 | 2 | 2 | 1 |
133 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 5 | 3 | 3 | 2 | 2 | 1 |
134 | 2 | 4 | 2 | 3 | 2 | 4 | 1 | 5 | 3 | 3 | 2 | 2 | 1 |
135 | 2 | 4 | 2 | 3 | 2 | 5 | 1 | 2 | 2 | 2 | 2 | 2 | 1 |
136 | 2 | 4 | 2 | 3 | 2 | 5 | 1 | 3 | 2 | 2 | 2 | 2 | 1 |
137 | 2 | 4 | 2 | 3 | 2 | 5 | 1 | 5 | 2 | 2 | 2 | 1 | 1 |
138 | 2 | 4 | 2 | 3 | 2 | 5 | 1 | 5 | 2 | 2 | 2 | 2 | 1 |
139 | 2 | 4 | 2 | 3 | 2 | 5 | 1 | 5 | 2 | 3 | 2 | 2 | 3 |
140 | 2 | 4 | 2 | 3 | 2 | 4 | 1 | 4 | 2 | 3 | 2 | 2 | 1 |
141 | 2 | 4 | 2 | 3 | 2 | 4 | 1 | 1 | 2 | 3 | 2 | 2 | 1 |
142 | 2 | 4 | 2 | 3 | 2 | 4 | 1 | 5 | 2 | 3 | 2 | 2 | 2 |
143 | 2 | 4 | 2 | 3 | 2 | 5 | 1 | 2 | 2 | 3 | 2 | 2 | 1 |
144 | 2 | 4 | 2 | 3 | 2 | 5 | 1 | 4 | 2 | 4 | 2 | 2 | 1 |
145 | 2 | 3 | 2 | 3 | 2 | 5 | 1 | 3 | 2 | 3 | 2 | 2 | 1 |
146 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 5 | 2 | 3 | 2 | 2 | 1 |
147 | 2 | 4 | 2 | 3 | 2 | 5 | 1 | 4 | 2 | 3 | 2 | 3 | 1 |
148 | 2 | 1 | 2 | 2 | 2 | 5 | 1 | 1 | 2 | 3 | 2 | 3 | 1 |
149 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 5 | 3 | 3 | 2 | 3 | 5 |
150 | 2 | 3′ | 2 | 3 | 2 | 5 | 1 | 5 | 3 | 3 | 2 | 3 | 2 |
151 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 5 | 1 | 3 | 2 | 3 | 1 |
152 | 2 | 2 | 6 | 3 | 2 | 5 | 1 | 5 | 3 | 3 | 2 | 3 | 1 |
153 | 2 | 2 | 5 | 3 | 2 | 5 | 1 | 5 | 3 | 3 | 2 | 3 | 2 |
154 | 2 | 3 | 4 | 3 | 2 | 5 | 1 | 5 | 3 | 3 | 2 | 3 | 1 |
155 | 2 | 2 | 4 | 3 | 2 | 5 | 1 | 5 | 3 | 3 | 2 | 3 | 1 |
156 | 2 | 2 | 5 | 3 | 2 | 5 | 1 | 4 | 3 | 3 | 2 | 3 | 1 |
157 | 2 | 2 | 4 | 3 | 2 | 5 | 1 | 4 | 3 | 3 | 2 | 3 | 1 |
158 | 2 | 2 | 2 | 3 | 2 | 5 | 1 | 6 | 3 | 3 | 2 | 3 | 1 |
159 | 2 | 2 | 4 | 3 | 2 | 5 | 1 | 6 | 3 | 3 | 2 | 4 | 1 |
160 | 2 | 2 | 4 | 4 | 2 | 5 | 1 | 2 | 3 | 3 | 2 | 3 | 1 |
161 | 1 | 2 | 4 | 4 | 2 | 5 | 1 | 8 | 3 | 5 | 2 | 4 | 1 |
162 | 2 | 2 | 2 | 2 | 2 | 4 | 1 | 5 | 3 | 2 | 2 | 3 | 1 |
163 | 2 | 2 | 3 | 3 | 1 | 6 | 1 | 5 | 3 | 2 | 2 | 6 | 1 |
164 | 2 | 3 | 2 | 3 | 2 | 1 | 1 | 6 | 3 | 3 | 2 | 1 | 1 |
165 | 2 | 2 | 3 | 2 | 2 | 5 | 1 | 5 | 2 | 5 | 2 | 2 | 1 |
166 | 2 | 2 | 7 | 3 | 2 | 6 | 1 | 1 | 2 | 4 | 2 | 2 | 1 |
The prime symbol for MIRU numbers in locus 4 designates that the invariable 3′-terminal 53-bp unit of locus 4 which is present in nearly all isolates is absent from that isolate(s).