Table 3.
Arabidopsis genes differentially expressed in torpedo stage embryos from Col-0 and Fe-1/Ler-0 and located in the vicinity of predicted FHE QTL
| Predicted QTL | Gene | Affy ID | Description | Col vs Fe/Ler (FC) | Predicted QTL |
|---|---|---|---|---|---|
| FHE1 | AT1G43780 | 260859_at | Serine carboxypeptidase-like 44 | -11.1 | 0.008 |
| AT1G48180 | 257493_at | unknown protein | -3.7 | 0.038 | |
| AT1G50520 | 261879_at | CYP705A27 (cytochrome P450) | 4.1 | 0.001 | |
| FHE2 | AT2G13970 | 265302_at | transposable element gene | 7.2 | 0.000 |
| AT2G14800 | 267110_at | unknown protein | 3.8 | 0.010 | |
| AT2G15325 | 257438_at | Lipid transfer protein (LTP) | 5.6 | 0.007 | |
| AT2G15790 | 265483_at | SQUINT Cyclophilin-40 | -5.2 | 0.000 | |
| FHE3 | AT2G33220 | 245169_at | similar to MEE4 | 5.8 | 0.000 |
| AT2G33790 | 267457_at | pollen Ole-e1 allergen | -5.5 | 0.001 | |
| AT2G35820 | 263947_at | unknown protein | -3.1 | 0.002 | |
| AT2G36550 | 263910_at | similar to NLI interacting factor | -9.3 | 0.001 | |
| FHE4 | AT4G39190 | 252938_at | GNS1/SUR4 membrane protein | -3.4 | 0.017 |
| FHE5 | AT5G36910 | 249645_at | THIONIN 2.2 | 16.5 | 0.002 |
| AT5G38580 | 249517_at | F-box family protein | -3.2 | 0.014 | |
| AT5G38700 | 249522_at | unknown protein | 3.2 | 0.011 | |
| AT5G38960 | 249479_at | germin-like protein, putative | 6.2 | 0.003 | |
| AT5G39060 | 258246_s_at | transposable element gene | 17.0 | 0.000 | |
| AT5G39100 | 249495_at | GERMIN-LIKE PROTEIN 6 | -3.8 | 0.042 | |
| AT5G39210 | 249472_at | CRR7 | 4.8 | 0.044 | |
| AT5G41650 | 249258_at | glyoxalase I family protein | 4.2 | 0.002 | |
| AT5G42280 | 249645_at | DC1 domain-containing protein | 3.9 | 0.000 |
Affy ID = Affymetrix gene chip identifier, FC = fold change >3.0.