Table 1.
Rank | Name | Transfac | TFBS # (in TSS±500 bp) | Peak # of TFBS (in TSS±500 bp) | % of TFBS Peak (in TSS±500 bp) | Gene # | |||
---|---|---|---|---|---|---|---|---|---|
0 h | 12 h | 0 h | 12 h | 0 h | 12 h | ||||
1 | ETS1 | V$CETS1P54_01 | 1587 | 341 | 262 | 21.5% | 16.5% | 294 | 229 |
2 | GABPA/NRF-2 | V$NRF2_01 | 1577 | 336 | 237 | 21.3% | 15.0% | 286 | 206 |
3 | ELK1 | V$ELK1_02 | 1667 | 333 | 254 | 20.0% | 15.2% | 279 | 215 |
4 | USF1 | V$USF_C | 441 | 79 | 45 | 17.9% | 10.2% | 71 | 44 |
V$USF_Q6 | 1136 | 146 | 97 | 12.9% | 8.5% | 132 | 92 | ||
5 | STAT1 | V$STAT1_03 | 282 | 50 | 41 | 17.7% | 14.5% | 48 | 39 |
V$STAT1_01 | 1179 | 146 | 122 | 12.4% | 10.3% | 134 | 110 | ||
6 | STAT4 | V$STAT4_01 | 106 | 17 | 17 | 16.0% | 16.0% | 4 | 4 |
7 | MYC/MAX | V$MYCMAX_02 | 580 | 90 | 76 | 15.5% | 13.1% | 68 | 55 |
V$MYCMAX_01 | 784 | 104 | 88 | 13.3% | 11.2% | 93 | 68 | ||
8 | CREB1 | V$CREB_01 | 666 | 103 | 87 | 15.5% | 13.1% | 97 | 83 |
9 | MAX | V$MAX_01 | 584 | 87 | 68 | 14.9% | 11.6% | 75 | 64 |
10 | ATF-2 | V$CREBP1_01 | 272 | 37 | 30 | 13.6% | 11.0% | 35 | 28 |
11 | STAT3 | V$STAT3_01 | 986 | 133 | 108 | 13.5% | 11.0% | 123 | 101 |
12 | SREBF1/SREBP1 | V$SREBP1_01 | 1038 | 140 | 108 | 13.5% | 10.4% | 110 | 93 |
13 | MYCN | V$NMYC_01 | 1467 | 195 | 125 | 13.3% | 8.5% | 170 | 114 |
14 | STAT6 | V$STAT_01 | 570 | 75 | 59 | 13.2% | 10.4% | 66 | 54 |
15 | ARNT | V$ARNT_01 | 835 | 108 | 89 | 12.9% | 10.7% | 102 | 87 |
16 | ARID5B/MRF2 | V$MRF2_01 | 478 | 61 | 57 | 12.8% | 11.9% | 56 | 52 |
17 | E2F1/2/3/4/5 | V$E2F_02 | 1301 | 166 | 121 | 12.8% | 9.3% | 149 | 110 |
18 | PBX1 | V$PBX1_01 | 220 | 28 | 21 | 12.7% | 9.5% | 28 | 21 |
bold: transcription factor with evidence of SUMO modification.