Table 1.
Summary of sequence assembly of P. bretschneideri mRNA pooled from ten different tissues samples
| Sequences (n) | Base pairs (bp) | Mean length (bp) | N50 (bp) | |
|---|---|---|---|---|
| Raw sequencing reads | 60,771,588 | 5,469,442,920 | 90 | - |
| Clean reads | 55,015,340 | 4,951,380,600 | 90 | - |
| Contigs (≥100 bp) | 132,987 | 44,990,137 | 338 | 474 |
| Clusters (≥150 bp) | 17,619 | 13,097,373 | 732 | 902 |
| Singletons (≥150 bp) | 72,608 | 32,694,777 | 452 | 550 |
| Total unigenes (≥150 bp) | 90,227 | 45,796,661 | 508 | 635 |