Table 9.
Identified methylation patterns
Strain | Genotype | 6 mA - Enriched motifs(percent) | 5mC | ||
---|---|---|---|---|---|
BL21(DE3) | dam(+), dcm(−), hsdSB(rB- mB-) | GATC (94.83) | None | ||
Bal225 | dam(−), dcm(−) | AAC6NGTGC (97.86) | GCAC6NGTT (96.71) | None | |
DH5α | dam(+), dcm(+) | AAC6NGTGC (98.15) | GCAC6NGTT (98.82) | GATC (98.49) | CCWGG (40.20) |
The nucleotide bases in bold are the nucleotides that are covalently modified by their respective enzymes.