Table 1.
Top 10 differentially regulated transcripts 1 day post transection
|
GenBank ID |
Gene name |
UniGene cluster description |
log
2
FC |
FC ratio | |
|---|---|---|---|---|---|
| R1 | NR1 | ||||
|
BC070531 |
MGC78829 |
Hypothetical protein MGC78829 |
-1.06 |
4.15 |
36.92 |
|
BC129680 |
sds |
Serine dehydratase |
-3.27 |
1.92 |
36.51 |
|
BC076749 |
stc1 |
Stanniocalcin 1 |
5.07 |
0.31 |
27.06 |
|
BC129695 |
LOC100036942 |
Hypothetical protein LOC100036942 |
-2.20 |
1.63 |
14.18 |
|
NM_001092398 |
glul-a |
Glutamate-ammonia ligase |
-2.28 |
1.51 |
13.76 |
|
BC073470 |
glul-b |
Glutamate-ammonia ligase |
-1.98 |
1.61 |
12.09 |
|
BC070543 |
aqp3-a |
Aquaporin 3 (Gill blood group) |
3.99 |
0.49 |
11.29 |
|
BC084414 |
bhmt |
Betaine-homocysteine S-methyltransferase |
-0.98 |
2.37 |
10.20 |
|
BC041489 |
Unknown |
Xenopus laevis, clone IMAGE:4930284, mRNA |
-1.48 |
1.26 |
6.70 |
| BC044682 | ucp2 | Uncoupling protein 2 (mitochondrial, proton carrier) | -0.80 | 1.94 | 6.69 |
Top 10 transcripts that, in addition to being differentially expressed after injury, show a different response when comparing regenerative and non-regenerative stages. Selection criteria: P < 0.01; sum of reads (transected + sham) higher or equal to the mean value of all transcripts. FC ratio: ratio between FC(R)/FC(NR) or FC(NR)/FC(R) (see Figure 2b for selection criteria). FC, fold change (transected/sham).