Table 2.
Top 10 differentially regulated transcripts 2 days post transection
| GenBank ID |
Gene name |
UniGene cluster description |
log
2
FC |
FC ratio | |
|---|---|---|---|---|---|
| R2 | NR2 | ||||
|
BC078115 |
hsp70 |
Heat shock 70 kDa protein |
-0.65 |
4.22 |
29.26 |
|
BC070531 |
MGC78829 |
Hypothetical protein MGC78829 |
-2.22 |
2.51 |
26.66 |
|
BC068675 |
cnfn-a |
Cornifelin |
-1.81 |
2.85 |
25.19 |
|
BC141766 |
LOC100049771 |
Hypothetical protein LOC100049771 |
1.39 |
5.32 |
15.26 |
|
BC157718 |
cfos-A |
C-fos proto-oncogene |
-1.88 |
1.73 |
12.19 |
|
BC129680 |
sds |
Serine dehydratase |
-1.72 |
1.73 |
10.93 |
|
BC084644 |
hla-dqa1 |
Major histocompatibility complex, class II, DQ alpha 1 |
-2.52 |
0.68 |
9.21 |
|
BC167488 |
LOC495461 |
Hypothetical LOC495461 |
-2.01 |
1.16 |
8.99 |
|
BC044682 |
ucp2 |
Uncoupling protein 2 (mitochondrial, proton carrier) |
-1.00 |
2.07 |
8.44 |
| AB075925 | olfm4 | Olfactomedin 4 | -0.35 | 2.32 | 6.36 |
Top 10 transcripts that, in addition to being differentially expressed after injury, show a different response when comparing regenerative and non-regenerative stages. Selection criteria: P < 0.01; sum of reads (transected + sham) higher or equal to the mean value of all transcripts. FC ratio: ratio between FC(R)/FC(NR) or FC(NR)/FC(R) (see Figure 2b for selection criteria). FC, fold change (transected/sham).