Table 3.
Top 10 differentially regulated genes 6 days post transection
| GenBank ID | Gene name |
UniGene cluster description |
log
2
FC |
FC ratio | |
|---|---|---|---|---|---|
| R6 | NR6 | ||||
|
BC041209 |
rrm2b |
Ribonucleotide reductase M2 B (TP53 inducible) |
-0.29 |
5.76 |
66.26 |
|
X82012 |
kif4a |
Kinesin family member 4A |
-0.24 |
5.68 |
60.55 |
|
BC043778 |
kpna2 |
Karyopherin alpha 2 (RAG cohort 1, importin alpha 1) |
-0.40 |
4.75 |
35.51 |
|
BC060435 |
MGC68771 |
Hypothetical protein MGC68771 |
1.02 |
6.08 |
33.36 |
|
BC070640 |
MGC81499 |
Hypothetical protein MGC81499 |
-0.41 |
4.58 |
31.78 |
|
AJ557446 |
kpna2 |
Karyopherin alpha-2 subunit like |
-0.37 |
4.35 |
26.35 |
|
BC084431 |
kifc1 |
Kinesin family member C1 |
-0.18 |
4.39 |
23.75 |
|
BC154984 |
ctsk |
Cathepsin K |
0.69 |
5.17 |
22.32 |
|
BC099253 |
LOC446922 |
Hypothetical protein LOC446922 |
-0.84 |
3.58 |
21.41 |
| BC044051 | mcm3 | MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) | -0.23 | 4.18 | 21.26 |
Top 10 transcripts that, in addition to being differentially expressed after injury, show a different response when comparing regenerative and non-regenerative stages. Selection criteria: P < 0.01; sum of reads (transected + sham) higher or equal to the mean value of all transcripts. FC ratio: ratio between FC(R)/FC(NR) or FC(NR)/FC(R) (see Figure 2b for selection criteria). FC, fold change (transected/sham).