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. 2014 May 7;46(1):30. doi: 10.1186/1297-9686-46-30

Table 6.

Estimated variance components (±SE) for both direct effect and indirect effects using Model 5 1

Parameter Neck BMS Body BMS 5 Tail BMS Total BMS
σ^AD2

0.26 ± 0.11
0.37 ± 0.14
0.34 ± 0.13
2.95 ± 0.90
σ^AD,S

0.12 ± 0.04
0.27 ± 0.05
0.21 ± 0.04
1.97 ± 0.30
σ^AS2

0.18 ± 0.04
0.27 ± 0.06
0.14 ± 0.04
1.6 ± 0.32
2σ^AT2

1.65 ± 0.25
2.56 ± 0.56
2.19 ± 0.30
19.13 ± 2.40
r^ADS

0.55 ± 0.22
0.67 ± 0.21
0.99 ± 0.23
0.90 ± 0.15
3ρ^s

0.09 ± 0.05
-0.04 ± 0.04
-0.09 ± 0.03
-0.02 ± 0.04
σ^em2

1.40 ± 0.12
3.15 ± 0.21
2.80 ± 0.18
14.8 ± 1.01
σ^ef2

3.07 ± 0.20
3.90 ± 0.25
6.10 ± 0.32
24.77 ± 1.54
4σ^P2

3.54 ± 0.11
4.95 ± 0.14
5.31 ± 0.16
31.09 ± 1.00
5h^D2

0.07 ± 0.10
0.07 ± 0.03
0.06 ± 0.02
0.10 ± 0.03
6T^2
0.47 ± 0.08 0.52 ± 0.21 0.41 ± 0.06 0.61 ± 0.08

1Model 5 was y = Xb + Z D a D  + Z S a S  + Vg * s + e; 2from Equation 2 using a pen size of 3.18; 3ρs=σ^g*s2σ^g*s2+0.5σ^em2+σ^ef2 is the non-genetic correlation between phenotypes of cage mates of the same sex; 4 for BMS, phenotypic variance was estimated from a separate analysis using the model y = Xb + e, this was done because our objective was to present a single number for phenotypic variance and heritability, covering both sexes since a single genetic variance was fitted covering both sexes; however, since our aim was to estimate the other model terms with the best fitting model, a separate analysis for phenotypic variance was performed; the standard errors of heritability estimates were calculated from the full model, averaging the residual variances for both sexes; 5although Model 4 was slightly better, we presented estimates obtained with Model 5 for reasons of consistency; 5h^D2=σAD2/σP2. 6T^2=σAT2/σP2.