Table 1. Summary of RNA-Seq and DGE data used in this study.

Accession No.	Cultivar	Planting location	Tissue types	No. of tags or read pairs	References	Note
SRA043582	Xushu 18	Chengdu	Leaves, stems and roots	48,716,884	[34]	Sequencing directly
SRA043584	Xushu 18	Chengdu	Flowers	41,533,336	[35]	Sequencing directly
SRA022988	Guangshu 87	Guangzhou	Roots	59,233,468	[32]	Re-analyze
SRA044884	Jingshu 6	Beijing	Roots	25,888,888	[33]	Re-analyze
GSE35929	Xushu 18	Chengdu	Young leaves	3,352,753	[34]	Sequencing directly
GSE35929	Xushu 18	Chengdu	Mature leaves	3,429,018	[34]	Sequencing directly
GSE35929	Xushu 18	Chengdu	Stems	3,453,654	[34]	Sequencing directly
GSE35929	Xushu 18	Chengdu	Fibrous roots	3,583,907	[34]	Sequencing directly
GSE35929	Xushu 18	Chengdu	Initial tuberous roots	3,630,619	[34]	Sequencing directly
GSE35929	Xushu 18	Chengdu	Expanding tuberous roots	3,566,630	[34]	Sequencing directly
GSE35929	Xushu 18	Chengdu	Harvested tuberous roots	3,514,272	[34]	Sequencing directly