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. 2014 Jun 4;90(6):1140–1145. doi: 10.4269/ajtmh.13-0260

Table 3.

Summary statistics of molecular variation and neutrality analysis in six populations of Oncomelania quadrasi, the Philippines*

Population n S H Uh Hd π ± SD θs ± SD Tajima's D Fu's Fs
AN 10 2 2 1 0.533 ± 0.095 0.107 ± 0.019 0.107 ± 0.054 1.641 (0.970) 2.338 (0.854)
MB 10 0 1 0 0.000 ± 0.000 NA NA NA NA
DG 10 0 1 1 0.000 ± 0.000 NA NA NA NA
MG 10 2 3 2 0.378 ± 0.181 0.056 ± 0.028 0.071 ± 0.054 −0.691 (0.218) −0.594 (0.105)
SM 10 1 2 2 0.200 ± 0.154 0.020 ± 0.015 0.035 ± 0.035 −1.112 (0.179) −0.339 (0.164)
TP 9 2 3 2 0.722 ± 0.097 0.106 ± 0.016 0.074 ± 0.056 1.494 (0.958) 0.453 (0.527)
All populations 59 10 10 8 0.859 ± 0.019 0.218 ± 0.012 0.215 ± 0.087 0.034 (0.721) −1.279 (0.100)
*

n = number of samples; S = number of segregating sites; H = number of haplotypes; Uh = unique haplotype; Hd = haplotype diversity; π = nucleotide diversity; θs = genetic diversity estimated from segregating sites; NA = not analyzed. P values are indicated in parentheses.