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. 2014 Jun 9;9(6):e98750. doi: 10.1371/journal.pone.0098750

Table 6. Performance of alignment methods for pairwise alignments and 3-way alignments of real biological networks (W = worm, F = fly, Y = yeast, H = human, M = mouse).

W-Y H-M W-F-Y
SPE CN MGC SPE CN MGC SPE CN MGC
GASOLINE 98.28% 4360 0.933 98.32% 17796 0.973 97.52% 6041 0.903
SMETANA 82.89% 4351 0.726 96.1% 18003 0.939 77.79% 6112 0.662
NetworkBLAST-M 93.77% 2545 0.742 81.2% 6747 0.713 84.13% 3178 0.595
IsoRankN 67.88% 3900 0.601 0% 0 0 56.29% 4526 0.485