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. 2014 Jun 9;9(6):e99424. doi: 10.1371/journal.pone.0099424

Table 1. Regions showing top scores in the genome.

region criteria Closest Distance to Description of 2nd closest Description of 2nd closest
gene closest gene closest gene gene gene
chr2:91959344-91968231 high number of components GGT8P inside gene pseudogene
chr6:33037767-33038449 high number of components HLA-DPA1/HLA-DPB1 inside gene Homo sapiens major histocompatibility complex, class II
chr:7203189-7420319641 high number of components ITGB8 50,684 bp integrin HLA-DPA1/ major histocompatibility
HLA-DPB1 complex, class II
praja ring finger 2,
chr5:108634323-108635534 high average degree PJA2 34,876 bp E3 ubiquitin protein ligase AK021888 unknown function
chr8:25935936-25937929 high average degree EBF2 inside gene early B-cell factor 2
Homo sapiens
chr6:32507854-32508257 high average path length HLA-DRB1 inside gene major histocompatibility complex, class II
Homo sapiens major
chr6:32568909-32569343 high average path length HLA-DRB5 11,297 bp major histocompatibility complex, class II HLA-DQA1 histocompatibility complex, class II
Homo sapiens
chr6:32611264-32611586 high average path length HLA-DQA1 inside gene major histocompatibility complex, class II
chr3:36921415-36921688 high number of vertices TRANK1 inside gene tetratricopeptide repeat and ankyrin repeat Containing 1
chr4:9176678-9178624 high number of vertices C9JJH3 33,759 bp Deubiquitinating enzyme LOC650293 transmembrane helix receptor
chr8:35105546-35106981 high number of vertices UNC5D inside gene receptor of netrin involved in nervous system
chr4:9200148-9202368 few components, but large number of vertices USP17L10 10,015 bp Deubiquitinating enzyme
chr6:31357915-31358747 few components, but large number of vertices MICA 8,814 bp MHC class I polypeptide-related sequence A HLA-B major histocompatibility complex, class I
chr6:31455010-31456012 few components, but large number of vertices MICB 6,646 bp MHC class I polypeptide-related Sequence B uc003ntm.3 HLA complex Group 26 (non-protein coding)