Table 1.
Protein | PDB ID code | rmsd, Å | No. of aligned Cα atoms | Amino acid sequence identity, %* | Z-score |
B. subtilis CymR | 2y75 | 1.5 | 119 | 55 | 17.2 |
E. coli IscR (unliganded) | 4hf0 | 2.0 | 116 | 41 | 16.8 |
E. coli IscR (DNA complex) | 4hf1 | 2.3 | 120 | 40 | 16.3 |
S. aureus CymR | 3t8t | 2.3 | 119 | 46 | 15.9 |
Putative transcriptional regulator from L. innocua | 3lwf | 3.8 | 124 | 48 | 14.9 |
B. cereus protein BC1842 | 1ylf | 2.7 | 118 | 20 | 13.9 |
S. aureus, Staphylococcus aureus; L. innocua, Listeria innocua; B. cereus, Bacillus cereus.
Structure-based sequence alignment, as calculated by Dali server (http://ekhidna.biocenter.helsinki.fi/dali_server/start) (60).