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. 2014 May 20;111(22):8131–8136. doi: 10.1073/pnas.1401532111

Fig. 4.

Fig. 4.

L1 allele frequency in CEU versus YRI samples. (A) L1s from the 1000GP “deletion” set: 77 L1 elements that are not fixed in both populations are shown. Black dots indicate 26 L1 elements with fixation index (Fst) significantly (FDR < 0.05) different from 0. (B) L1s from the 1000GP “insertion” set: 53 L1s that are not fixed in both populations. Black dots indicate 13 L1 elements with fixation index (Fst) significantly (FDR < 0.05) different from 0. (C) QQ plot comparing the distribution of Fst values for L1s (“deletion” and “insertion” sets combined) and genome-wide SNPs.