Extended Data Table 5.
PLD3 is associated with risk for AD in African-Americans
| Cases (n=130) | Controls (n=172) | |||||
|---|---|---|---|---|---|---|
| Variant | carriers | Carrier Freq % | carriers | Carrier Freq % | p-value | OR (95% CI) |
| G63S | 1 | 0.77% | 0 | 0.00% | 0.43 | NA |
| K228R | 1 | 0.77% | 0 | 0.00% | 0.43 | NA |
| V232M | 3 | 2.31% | 0 | 0.00% | 0.07 | NA |
| I364I | 6 | 4.62% | 4 | 2.33% | 0.33 | 2.02 (0.56-7.29) |
| A442A | 4 | 3.08% | 0 | 0.00% | 0.03 | NA |
| Total | 15 | 11.54% | 4 | 2.33% | 1.4×10−03 | 5.48 (1.77-16.92) |
PLD3 was sequenced in a total of 302 African-Americans. Table shows the counts for single SNPs and the gene-based analysis for PLD3 in 130 AA cases and 172 controls. P-values were calculated using the Fisher's exact test.