Table 1.
Genes in the Streptococcus bovis / Streptococcus equinus complex potentially involved in adaptation to the rumen
| Function | Gene | S. gallolyticus UCN34 | S. gallolyticus ATCC 43143 | S. gallolyticus ATCC BAA-2069 | S. pasteurianus ATCC 43144 | S. macedonicus ACA-DC 198 | S. infantarius CJ18 |
|---|---|---|---|---|---|---|---|
| Pullulanase |
- (a) |
GALLO_1462 |
SGGB_1458 |
SGGBAA2069_c14850 |
SGPB_1362 (t) |
SMA_1464 (s) |
Sinf_1270 |
| |
|
|
|
|
|
SMA_1465 (s) |
|
| Pullulanase |
- |
GALLO_0781 |
SGGB_0764 |
SGGBAA2069_c07530 |
- |
SMA_0719 (p) |
- |
| |
|
|
|
|
|
SMA_0720 (r) |
|
| |
|
|
|
|
|
SMA_0721 (p) |
|
| α-amylase, neopullulanase |
- |
GALLO_0753 |
SGGB_0736 |
SGGBAA2069_c07260 |
- |
- |
- |
| Fructan hydrolase |
fruA |
GALLO_0112 |
SGGB_0110 |
SGGBAA2069_c01280 |
- |
- |
- |
| Beta-1,4-endoglucanase V (cellulase) |
- |
GALLO_0330 |
SGGB_0358 |
SGGBAA2069_c03180 |
- |
- |
- |
| Cinnamoyl ester hydrolase |
cinA |
GALLO_0140 |
SGGB_0137 |
SGGBAA2069_c01580 |
- |
- |
- |
| Mannanase |
- |
GALLO_0162 |
SGGB_0206 |
SGGBAA2069_c01800 |
- |
- |
Sinf_0174 (p) |
| Endo-beta-1,4-galactanase |
- |
GALLO_0189 |
SGGB_0233 |
SGGBAA2069_c02070 |
SGPB_0176 |
SMA_0214 (p) |
Sinf_0197 (p) |
| Pectate lyase |
- |
GALLO_1577 |
SGGB_1576 |
SGGBAA2069_c16050 |
- |
- |
Sinf_1418 |
| Pectate lyase |
- |
GALLO_1578 |
SGGB_1577 |
SGGBAA2069_c16060 |
SGPB_1461 (p) |
SMA_1582 (p) |
- |
| |
|
|
|
|
|
SMA_1583 (s) |
|
| |
|
|
|
|
|
SMA_1584 (s) |
|
| Malate transporter |
mleP |
GALLO_2048 |
SGGB_2031 |
SGGBAA2069_c20060 |
SGPB_1855 |
SMA_1945 |
Sinf_1750 |
| Malate dehydrogenase |
mleS |
GALLO_2049 |
SGGB_2032 |
SGGBAA2069_c20070 |
SGPB_1856 |
SMA_1946 |
Sinf_1751 |
| PTS system, mannitol-specific IIBC component |
mtlA |
GALLO_0993 |
SGGB_0982 |
SGGBAA2069_c09680 |
- |
SMA_0905 (p) |
- |
| Mannitol operon transcriptional antiterminator |
mtlR |
GALLO_0994 |
SGGB_0983 |
SGGBAA2069_c09690 |
- |
SMA_0906 (p) |
- |
| |
|
|
|
|
|
SMA_0907 |
|
| |
|
|
|
|
|
SMA_0908 |
|
| |
|
|
|
|
|
SMA_0909 |
|
| |
|
|
|
|
|
SMA_0910 |
|
| |
|
|
|
|
|
SMA_0911 |
|
| |
|
|
|
|
|
SMA_0912 |
|
| |
|
|
|
|
|
SMA_0913 |
|
| |
|
|
|
|
|
SMA_0914 |
|
| |
|
|
|
|
|
SMA_0915 |
|
| |
|
|
|
|
|
SMA_0916 |
|
| |
|
|
|
|
|
SMA_0917 |
|
| PTS system, mannitol-specific IIA component |
mtlF |
GALLO_0995 |
SGGB_0984 |
SGGBAA2069_c09700 |
- |
- |
- |
| Mannitol-1-phosphate 5-dehydrogenase |
mtlD |
GALLO_0996 |
SGGB_0985 |
SGGBAA2069_c09710 |
- |
- |
- |
| α-amylase |
- |
GALLO_0757 |
SGGB_0740 |
SGGBAA2069_c07300 |
- |
- |
- |
| α-amylase |
amyE |
GALLO_1632 |
SGGB_1646 |
SGGBAA2069_c16600 |
SGPB_1505 (p) |
SMA_1612 (t) |
Sinf_1443 |
| α-amylase |
- |
GALLO_1043 |
SGGB_1033 |
SGGBAA2069_c10200 |
SGPB_0905 |
SMA_0972 |
Sinf_0846 |
| tannase |
tanA |
GALLO_0933 |
SGGB_0917 |
SGGBAA2069_c09070 (s) |
- |
- |
- |
| |
|
|
|
SGGBAA2069_c09080 (s) |
|
|
|
| Tannase (similar to tanA) |
- |
GALLO_1609 |
SGGB_1624 |
SGGBAA2069_c16370 |
- |
- |
- |
| Phenolic acid decarboxylase |
padC |
GALLO_2106 |
SGGB_2089 |
SGGBAA2069_c21040 |
SGPB_1899 |
SMA_2074 |
- |
| Carboxymuconolactone decarboxylase |
- |
GALLO_0906 |
SGGB_0891 |
SGGBAA2069_c08850 |
SGPB_0775 |
- |
- |
| Bile salt hydrolase | bsh | GALLO_0818 | SGGB_0803 | SGGBAA2069_c07920 | SGPB_0678 | SMA_0753 (p) | Sinf_0639 |
(a) Not found; (t) Truncated; (s) Split CDSs corresponding to fragments of the original gene not yet characterized as pseudogenes; (p) Pseudogenes; (r) Transposase genes in italics.