Table 1.
miRNA-target prediction databases from miRror-Suite
| MDB | Genes | miRNAs | miRNA families | Compact ratio |
|---|---|---|---|---|
| MAMI | 11 914 | 317 | 150 | 2.11 |
| PITA all | 17 216 | 677 | 348 | 1.95 |
| PITA top | 8292 | 677 | 348 | 1.95 |
| PicTar 4way | 7817 | 178 | 98 | 1.82 |
| PicTar 5way | 2972 | 129 | 70 | 1.84 |
| RNA22 | 11 641 | 313 | 148 | 2.11 |
| TargetRank all | 14 874 | 555 | 261 | 2.13 |
| TargetRank conserved | 10652 | 127 | 75 | 1.69 |
| TargetScan conserved | 25 186 | 1536 | 406 | 3.78 |
| TargetScan nonconserved | 30 802 | 1538 | 407 | 3.78 |
| miRDB | 28 890 | 1918 | 303 | 6.33 |
| miRNAMap2 | 6040 | 470 | 260 | 1.81 |
| microCosm | 16 933 | 711 | 261 | 2.72 |
| microRNA.org | 15 400 | 677 | 348 | 1.95 |
| microRNA.org conserved | 31 526 | 248 | 125 | 1.98 |
| microRNA.org nonconserved | 32 601 | 850 | 276 | 3.08 |
| microT | 16 882 | 555 | 261 | 2.13 |
| mirZ | 31 302 | 1205 | 396 | 3.04 |