Table 2. Top unique homologs of A3404 from the DALI server (Z score > 10).
Molecule | PDB code | Type | Z † | R.m.s.d. () | Res.‡ | Align.§ | Identity (%) | Method | Reference |
---|---|---|---|---|---|---|---|---|---|
CurA ACPI | 2liu | PKS ACP | 14.0 | 1.0 | 99 | 80 | 30 | NMR | Busche et al. (2011 ▶) |
BlmI | 4i4d | Type II NRPS PCP | 13.9 | 1.6 | 83 | 78 | 19 | X-ray | Lohman et al. (2014 ▶) |
Protein ASL1650 | 2afd | PKS/NRPS carrier protein | 13.0 | 1.4 | 88 | 79 | 32 | NMR | Johnson et al. (2006 ▶) |
Erythronolide synthase | 2ju2 | PKS ACP | 12.0 | 1.6 | 95 | 79 | 29 | NMR | Alekseyev et al. (2007 ▶) |
EntF | 3tej | NRPS PCP | 11.5 | 2.0 | 320 | 72 | 19 | X-ray | Liu et al. (2011 ▶) |
TtACP | 1x3o | Thermus thermophilus ACP | 11.2 | 1.8 | 78 | 80 | 23 | X-ray | RIKEN Structural Genomics/Proteomics Initiative (unpublished work) |
Tyrocidine synthetase 3 | 2jgp | Type II NRPS PCP | 11.0 | 1.9 | 520 | 74 | 19 | X-ray | Samel et al. (2007 ▶) |
SaACP | 4dxe | Staphylococcus aureus ACP | 10.7 | 1.8 | 75 | 77 | 16 | X-ray | Center for Structural Genomics of Infectious Diseases (unpublished work) |
Mupircin ACP | 2l22 | Tandem PKS ACP | 10.6 | 1.8 | 76 | 183 | 22 | NMR | Haines et al. (2013 ▶) |
ScACP | 2koq | Streptomyces coelicolor ACP | 10.4 | 2.1 | 79 | 81 | 14 | NMR | Posko et al. (2010 ▶) |
RcACP | 2xz1 | Rice ACP | 10.4 | 2.2 | 76 | 82 | 18 | X-ray | Guy et al. (2011 ▶) |
PfACP | 3gzm | Plasmodium falciparum ACP | 10.2 | 2.0 | 77 | 81 | 18 | X-ray | Gallagher Prigge (2010 ▶) |
RpACP | 2kw2 | Rhodopseudomonas palustris ACP | 10.1 | 1.9 | 74 | 101 | 19 | NMR | Ramelot et al. (2012 ▶) |
SoACP | 2fve | Spinach ACP | 10.0 | 2.1 | 77 | 82 | 18 | NMR | Zornetzer et al. (2006 ▶) |
The Z-score is a pairwise comparison score to allow ranking of the results.
The number of total residues in a given structure.
The number of residues that were aligned with the query sequence (A3404).