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. 2014 Jun 11;9(6):e96969. doi: 10.1371/journal.pone.0096969

Table 1. OPLS-DA coefficients and their variable importance in projection (VIP) for significantly changed metabolites in serum.

Metabolites Multi-criteria assessment (MCA)c
No. Names δ 1H (ppm) HFD vs. Normal HFD+GAH vs. HFD
Coefficient valued VIP p valuee Coefficient valued VIP p valuee
Large macromolecules a
1 HDL 0.86 (m) 0.974 5.59 ↑, <0.001 −0.777 5.18 ↓, 0.001
2 LDL 0.88 (m) 0.953 4.06 ↑, <0.001 −0.817 3.88 ↓, 0.001
8 Lipid 1.28 (m) 0.857 4.00 ↑, <0.001 −0.882 4.77 ↓, <0.001
16 N-acetyl-glycoprotein 2.04 (s) 0.882 2.36 ↑, <0.001 −0.840 2.50 ↓, 0.001
17 O-acetyl-glycoprotein 2.14 (s) −0.896 1.09 ↓, <0.001 0.610 1.18 ↑, 0.003
24 PUFA 2.75 (m) 0.985 2.93 ↑, <0.001 −0.776 2.25 ↓, 0.001
25 Albumin 3.02 −0.947 1.43 ↓, <0.001 0.776 1.39 ↑, 0.002
29 Phosphotidylcholine 3.23 (s) 0.904 4.52 ↑, <0.001 −0.860 5.85 ↓, <0.001
36 UFA 5.29 (m) 0.983 4.37 ↑, <0.001 −0.838 3.93 ↓, <0.001
Small molecules b
3 Isoleucine 1.01 (d) −0.915 1.56 ↓, <0.001 0.744 1.14 ↑, 0.031
4 Leucine 0.97 (t) −0.732 2.07 ↓, 0.001 0.713 1.83 ↑, 0.001
5 Valine 1.04 (d) −0.755 2.10 ↓, <0.001 0.628 1.61 ↑, 0.010
6 Isobutyrate 1.14 (d) −0.681 0.92 ↓, 0.003 0.605 1.15 ↑, 0.008
7 3-hydroxybutyrate 1.20 (d) −0.507 2.18 –, 0.113 0.584 5.24 ↑, 0.017
9 Lactate 4.11 (q) −0.683 2.10 –, 0.285 0.601 2.77 –, 0.124
10 Alanine 1.48 (d) −0.585 1.93 ↓, 0.013 0.519 1.76 –, 0.067
11 Lysine 3.03 (t) −0.815 1.19 ↓, 0.001 0.791 1.87 ↑, 0.001
12 Arginine 1.67 (m) −0.701 0.98 ↓, 0.003 0.711 0.99 ↑, 0.003
13 Ornithine 3.06 (t) −0.303 0.68 –, 0.254 0.742 1.28 ↑, 0.005
14 Acetate 1.92 (s) −0.742 1.83 ↓, 0.003 0.568 1.17 –, 0.078
18 Glutamate 2.35 (t) −0.843 1.21 ↓, 0.003 0.834 1.45 ↑, 0.006
19 Glutamine 2.45 (m) −0.614 1.30 ↓, <0.001 0.737 1.83 ↑, 0.001
20 Acetoacetate 2.29 (s) −0.591 1.23 –, 0.051 0.664 2.50 ↑, 0.005
21 Pyruvate 2.37 (s) −0.818 1.48 ↓, <0.001 0.646 1.47 ↑, 0.031
23 Citrate 2.53 (d) −0.786 1.31 ↓, <0.001 0.492 0.71 –, 0.136
32 Betaine 3.27 (s) −0.774 2.87 ↓, 0.001 0.623 2.21 –, 0.128
35 Glycine 3.56 (s) −0.722 2.93 ↓, 0.001 0.737 3.34 ↑, 0.004
38 Tyrosine 6.90 (d) −0.775 0.70 ↓, <0.001 0.811 0.92 ↑, 0.002
39 1-Methylhistidine 7.06 (s) −0.760 0.69 ↓, 0.001 0.779 0.65 ↑, 0.003
40 Phenylalanine 7.33 (m) −0.920 0.65 ↓, <0.001 0.837 0.62 ↑, 0.003
a

Coefficient values are calculated by LED-BPP coefficient-coded loadings plots.

b

Coefficient values are calculated by CPMG coefficient-coded loadings plots.

c

Multi-criteria assessment (MCA) was performed by followed criteria: 1. Coefficient value |r| >0.576, 2. VIP>1, 3. p value <0.05.

d

The coefficients from the OPLS-DA results; positive and negative signs indicate positive and negative correlations in the concentrations of serum metabolites.

e

Independent t test (two-tailed).

HDL: high-density lipoprotein; LDL: low-density lipoprotein; PUFA: Polyunsaturated fatty acids; UFA: unsaturated fatty acids.