TABLE 2.
General features of the genome of N. nova SH22a and a comparison of fully sequenced Nocardia genomes
| Characteristic | Value |
|||
|---|---|---|---|---|
| N. nova SH22aa | N. farcinica IFM10152a (31) | N. cyriacigeorgica GUH-2a (97) | N. brasiliensis HUJEG-1b (33) | |
| Genome size (bp) | 8,348,532 | 6,292,344 | 6,194,645 | 9,436,348 |
| No. of circular chromosomes | 1 | 1 | 1 | 1 |
| No. of plasmids | 0 | 2 | 0 | 0 |
| GC content (%) | 67.77 | 70.69 | 68.37 | 68.05 |
| Coding density (%) | 89.5 | 90.4 | 87.1 | 87.7 |
| No. of protein-encoding genes | 7,583 | 5,936 | 5,491 | 8,414 |
| With function prediction | 5,494 | 3,039 | 3,065 | 2,669 |
| Without function prediction | 2,089 | 2,897 | 2,426 | 5,745 |
| No. of rRNA genes | 9 | 9 | 9 | 9 |
| No. of tRNA genes | 49 | 54 | 49 | 51 |
a
Data were taken from the Integrated Microbial Genomes (IMG) database of the Department of Energy, Joint Genome Institute.
b
Data are from reference 33.