Table 3.
Complete sequenced fragment (882 bp) | Coding region (663 bp) | Non-coding region (219 bp) | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gene |
2n |
S |
h |
hd |
π |
θ |
D |
D* |
S |
h |
hd |
π
c
|
θ |
D |
D* |
S |
h |
π
nc
|
D |
D* |
Benin |
24 |
1 |
2 |
0.08 |
0.09 |
0.3 |
−1.15 ns |
−1.6 ns |
1 |
2 |
0.08 |
0. 13 |
0.4 |
−1.15 ns |
−1.6 ns |
0 |
1 |
0 |
– |
– |
Cameroon |
14 |
7 |
8 |
0.89 |
2.9 |
2.5 |
0.6 ns |
0.21 ns |
5 |
6 |
0.77 |
2.4 |
2.4 |
0.12 ns |
−0.22 ns |
2 |
3 |
4.2 |
1.3 ns |
0.93 ns |
Ghana |
16 |
19 |
10 |
0.86 |
5.4 |
6.8 |
−0.8 ns |
−0.38 ns |
4 |
5 |
0.67 |
2.0 |
1.8 |
0.35 ns |
0.25 ns |
15 |
9 |
16 |
−1.1 ns |
−0.55 ns |
Mozambique |
10 |
12 |
8 |
0.95 |
3.6 |
5.2 |
−1.4 ns |
−1.4 ns |
2 |
3 |
0.37 |
0.6 |
1.1 |
−1.4 ns |
−1.6 ns |
10 |
8 |
13 |
−1.3 ns |
−1.25 ns |
Malawi |
18 |
14 |
7 |
0.78 |
4.4 |
4.6 |
−0.14 ns |
1.14 ns |
4 |
5 |
0.71 |
1.6 |
1.7 |
−0.28 ns |
0.21 ns |
10 |
6 |
13 |
−0.05 ns |
1.41* |
Uganda |
10 |
17 |
9 |
0.97 |
7.5 |
6.8 |
0.5 ns |
0.15 ns |
3 |
4 |
0.71 |
1.7 |
1.6 |
−0.76 ns |
−1.12 ns |
14 |
7 |
26 |
0.72 ns |
0.41 ns |
Total | 92 | 37 | 39 | 0.86 | 5.1 | 8.7 | −1.3 ns | −0.33 ns | 13 | 16 | 0.73 | 2.3 | 3.8 | −1.07 ns | −0.8 ns | 24 | 29 | 0.013 | −1.3 ns | −0.06 ns |
2n, number of sequences; D, Tajima’s statistics; D*, Fu and Li’s statistics; h, number of haplotypes; hd, haplotype diversity; ns, not significant; π, nucleotide diversity multiplied by 103; S, number of polymorphic sites; θ, Watterson’s estimator (per site) multiplied by 103.