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. 2014 Jun 12;9(6):e99116. doi: 10.1371/journal.pone.0099116

Figure 1. A synthetic planar aggregate and its analysis by CellFIT.

Figure 1

(A) shows a representative region consisting of 50 complete cells, 177 complete edges, and 30 partial cells and corresponding incomplete edges taken from a larger aggregate. Its cells were assigned to one of three types, as indicated by coloured shading and a finite element model was used to determine its annealed state, as shown. The edge tensions were assigned the following values according to their type 5∶6∶7∶10∶11∶12. (B) shows the topological and geometric information provided to the CellFIT algorithms. The spectra shown in (C) provide legends for the tension and pressure colours used in the remaining parts of the figure. (D) shows the ground truth Standard Tensions and Pressures as determined by the FE annealing process, and extracted using Equation 16 and its associated text. (E) shows the values that the standard Polyarc version of CellFIT calculates based solely on the data in (B). (F) shows the results obtained by calculating the angles at triple junctions using straight edges only. (G) and (H) show CellFIT results when noise levels of 2 or 5 are respectively introduced into the CellFIT input data. A noise level of x corresponds to x degrees of angle error and x% curvature error. (I) shows CellFIT results obtained after the original mesh was converted into an image and redigitized before analysis.