Table 3. Gibbs free unfolding energy of HET-s(218–289) amyloid fibrils.
Variant | ΔG(a) (kcal/mol) | ΔΔG (kcal/mol) | m-value | Reproducibility and denaturation curve shape when compared to wt | In vivo [Het-s] Property ([Het-s] activity/propagation rate/spore killing (Figure 2; Tables 1–2) |
WT | 2.9±0.2 | wt | y, wt | ||
K229A | 4.4±0.0 | 1.5±0.2 | wt | y, wt-like | wt-like |
I231A | n. d. | n. d. | not wt | y, no plateau at low GuHCl conc. | [Het-s] reduced |
V239A | 3.9±0.5 | 1±0.5 | wt | y | wt-like |
Q240A | n. d. | n. d. | not wt | n, no plateau at low GuHCl conc., not a two-state process | [Het-s] reduced/reduced propagation and spore killing |
L241A | 3.9±0.1 | 1.0±0.3 | wt | y, wt-like | wt-like |
N262A | n. d. | n. d. | not wt | y, not a two-state process | [Het-s] reduced |
V264A | 4.0±0.2 | 1.0±0.3 | wt | y, wt-like | wt-like |
V267A | 2.9±0.1 | 0.2±0.3 | wt | y, wt-like | wt-like |
E272A | 4.8±0.1 | 1.9±0.3 | wt | y, wt-like | wt-like/reduced propagation |
S273A | 4.3±0.1 | 1.4±0.2 | wt | y, wt-like | wt-like |
G278A | 2.5±0.3(b) 1.3±0.1(b) | -0.8±0.4 | not-wt | n, no plateau at low GuHCl conc. | [Het-s] strongly reduced |
F286A | n.d | n.d | not wt | y, not a two-state process | [Het-s] strongly reduced |
D288A | 4.1±0.1 | 1.2±0.3 | not wt | y, wt-like | [Het-s] reduced/enhanced prion formation |
F286A/W287A | n.d | n.d | not wt | y, not a two-state process | n.d. |
The ΔG value was obtained using the m-value of the wt unless stated in the fourth column that the curve fitting was improved with a free m-value different from the corresponding wt one.
The ΔG value was obtained using a free m-value. Two different denaturation curves were obtained and their individual ΔG values are listed.