Table 2. Selected factors that suppress PGKB expression.
Locus number | Description | Number locations | Number experiments | PGKB mean | BLA mean |
RNA binding proteins | |||||
Tb927.11.12120 | RBP9 | 5 | 4 | 10.52 | 0.05 |
Tb927.8.2780 | RBP10 | 4 | 2 | 2.63 | 0.94 |
Tb927.11.5850 | RBP38 | 7 | 3 | 2.89 | 0.51 |
Tb927.6.3480 | DRBD5 | 5 | 3 | 2.47 | 0.65 |
Tb927.4.400 | DRBD7 | 13 | 4 | 3.39 | 0.85 |
Tb927.3.3940 | DRBD11 | 14 | 2 | 2.96 | 0.77 |
Tb927.8.710 | DRBD17 | 17 | 3 | 1.86 | 0.48 |
Tb927.10.310 | PUF3 | 9 | 2 | 2.85 | 1.85 |
Tb927.3.5250 | ZC3H8 | 16 | 4 | 2.95 | 0.48 |
Tb927.5.1580 | ZC3H13 | 12 | 4 | 3.17 | 0.18 |
Tb927.6.4720 | ZC3H15 | 7 | 5 | 4.40 | 0.05 |
Tb927.7.2680 | ZC3H22 | 8 | 3 | 2.74 | 0.64 |
Tb927.9.9520 | ZC3H29 | 4 | 4 | 2.59 | 0.05 |
Tb927.10.12740 | ZC3H35 | 9 | 4 | 2.33 | 0.17 |
Tb927.7.5380 | dsRNA-BD | 10 | 3 | 2.13 | 0.55 |
RNA degradation | |||||
Tb927.8.1960 | NOT11 | 7 | 3 | 2.37 | 0.52 |
Tb927.6.850 | NOT2 | 8 | 3 | 2.96 | 1.66 |
Tb927.3.1920 | NOT5 | 6 | 3 | 2.35 | 0.75 |
Tb927.11.15000 | SMN-like | 4 | 4 | 2.40 | 0.53 |
Translation factor | |||||
Tb927.9.11050 | 4E-IP | 17 | 5 | 4.49 | 0.01 |
The number of locations is the number of positions with at least 3-fold enrichment in the PGKB experiments; Number of experiments: this is the number of experiments (out of 3 PGKB and two BLA) that showed either a 2-fold enrichment per CDS (PGKB) or a 2-fold depletion per CDS (for BLA). PGKB mean: arithmetic mean of enrichment factors for all 3 PGKB experiments. BLA mean: arithmetic mean of enrichment factors for the 2 BLA experiments.