Table 1.
Strain | Population | SNP | pSNP | Total | Copy Number (S.E.) |
Q32.3 | European | 0 | 0 | 0 | 74 (0.109) |
Q89.8 | European | 0 | 0 | 0 | 81 (0.228) |
Q95.3 | European | 0 | 0 | 0 | 46 (0.093) |
S36.7 | European | 0 | 0 | 0 | 57 (0.109) |
T21.4 | European | 0 | 0 | 0 | 66 (0.074) |
Y6.5 | European | 1 | 0 | 1 | 65 (0.085) |
Y7.2 | European | 1 | 0 | 1 | 78 (0.108) |
Z1.1 | European | 1 | 0 | 1 | 83 (0.103) |
Q62.5 | European | 2 | 2 | 4 | 68 (0.096) |
CBS 432 (T) | European | 5 | 0 | 5 | 68 (0.072) |
Q59.1 | European | 0 | 5 | 5 | 52 (0.062) |
DBVPG 4650 | European | 2 | 4 | 6 | 87 (0.107) |
KPN 3828 | European | 7 | 1 | 8 | 82 (0.112) |
KPN 3829 | European | 7 | 1 | 8 | 79 (0.124) |
CBS 5829 | European | 6 | 3 | 9 | 88 (0.095) |
N-17 | European | 1 | 17 | 18 | 78 (0.068) |
IFO 1804 | Far Eastern | 39 | 0 | 39 | 96 (0.187) |
N-44 | Far Eastern | 38 | 1 | 39 | 52 (0.085) |
N-45 | Far Eastern | 4 | 36 | 40 | 66 (0.049) |
N-43 | Far Eastern | 40 | 1 | 41 | 64 (0.126) |
A12 | American | 84 | 0 | 84 | 45 (0.065) |
A4 | American | 88 | 0 | 88 | 66 (0.098) |
UFRJ 50816 | American | 92 | 0 | 92 | 72 (0.090) |
UFRJ 50791 | American | 95 | 0 | 95 | 64 (0.107) |
YPS138 | American | 95 | 0 | 95 | 76 (0.099) |
DBVPG 6304 | American | 97 | 2 | 99 | 53 (0.094) |
Total | 705 | 73 | 778 |
Notes: Table of SNP and pSNP polymorphisms for each S. paradoxus strain, compared to the reference strain CBS432, as identified using the TURNIP software. Polymorphism counts are taken from West et al., in preparation. For each strain, the population and estimated ribosomal DNA copy number (along with the standard error of the copy number estimate) are also given. Ordering the strains by total polymorphism count results in the strains being split into their population groups.