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. 2014 Mar 27;63(4):543–554. doi: 10.1093/sysbio/syu019

Table 1.

rDNA sequence variation uncovered within the S. paradoxus dataset

Strain Population SNP pSNP Total Copy Number (S.E.)
Q32.3 European 0 0 0 74 (0.109)
Q89.8 European 0 0 0 81 (0.228)
Q95.3 European 0 0 0 46 (0.093)
S36.7 European 0 0 0 57 (0.109)
T21.4 European 0 0 0 66 (0.074)
Y6.5 European 1 0 1 65 (0.085)
Y7.2 European 1 0 1 78 (0.108)
Z1.1 European 1 0 1 83 (0.103)
Q62.5 European 2 2 4 68 (0.096)
CBS 432 (T) European 5 0 5 68 (0.072)
Q59.1 European 0 5 5 52 (0.062)
DBVPG 4650 European 2 4 6 87 (0.107)
KPN 3828 European 7 1 8 82 (0.112)
KPN 3829 European 7 1 8 79 (0.124)
CBS 5829 European 6 3 9 88 (0.095)
N-17 European 1 17 18 78 (0.068)
IFO 1804 Far Eastern 39 0 39 96 (0.187)
N-44 Far Eastern 38 1 39 52 (0.085)
N-45 Far Eastern 4 36 40 66 (0.049)
N-43 Far Eastern 40 1 41 64 (0.126)
A12 American 84 0 84 45 (0.065)
A4 American 88 0 88 66 (0.098)
UFRJ 50816 American 92 0 92 72 (0.090)
UFRJ 50791 American 95 0 95 64 (0.107)
YPS138 American 95 0 95 76 (0.099)
DBVPG 6304 American 97 2 99 53 (0.094)
Total 705 73 778

Notes: Table of SNP and pSNP polymorphisms for each S. paradoxus strain, compared to the reference strain CBS432, as identified using the TURNIP software. Polymorphism counts are taken from West et al., in preparation. For each strain, the population and estimated ribosomal DNA copy number (along with the standard error of the copy number estimate) are also given. Ordering the strains by total polymorphism count results in the strains being split into their population groups.