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. 2014 Mar 8;65(11):2937–2947. doi: 10.1093/jxb/eru083

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© The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 3. — Merging of microarray data from shade-regulated and IAA-regulated genes. (A) Venn diagrams illustrating the overlap between the rapidly downregulated (left) and upregulated (right) group of genes in wild-type and sav3 mutant seedlings in response to 1h of simulated shade (Tao et al., 2008), as listed in Table S2. The total number of genes in each group is indicated in parentheses. Comparisons between genotypes defined two classes of robust shade-regulated genes: shade downregulated (class SD) and shade upregulated (class SU), as listed in Table S3. The numbers of genes in each sector is indicated. (B) Venn diagrams illustrating the overlap between the class SD (left), class SU (right), and class of IAA upregulated (top) and downregulated (bottom) genes. The comparison between the different groups of genes defines the class S+A (Table S3).