Table 1.
Diversity statistics for Archaea, Bacteria, and “Major” phylum groups. Coverage = #OTUs/rarefaction estimate; OTU and abundance were calculated using a 0.03 dissimilarity cut-off.
Group | Total sequences | Unclassified to phylum | Number of OTUs | ACE | Chao1 | Rarefaction estimation | Current coverage (%) |
---|---|---|---|---|---|---|---|
Bacteria | 12583 | none | 6383 | 30581 | 17176 | 15768 | 41 |
Pro | 5763 | 2791 | 12472 | 7245 | 6811 | 40 | |
Act | 783 | 418 | 2280 | 1088 | 1033 | 46 | |
Aci | 1345 | 731 | 2972 | 1693 | 1602 | 28 | |
Fir | 973 | 540 | 3595 | 1856 | 1915 | 54 | |
Bact | 2244 | 868 | 2700 | 1887 | 1601 | 59 | |
Archaea | 1735 | none | 521 | 1131 | 884 | 883 | 83 |
Eur | 925 | 418 | 681 | 505 | 504 | 62 | |
Cre | 810 | 197 | 442 | 311 | 320 | 41 |