Table 1.
Top 50 PM or PM-related proteins highly differentially expressed in lung adenocarcinoma compared to normal lung tissue
| Accession | Description | Score | Coverage | Unique Peptides | PSMs | 117/118 |
|---|---|---|---|---|---|---|
| P51674 | Neuronal membrane glycoprotein M6-a | 23.12 | 3.96% | 1 | 1 | 0.13 |
| P01914 | HLA class II histocompatibility antigen, DR-1 beta chain | 140.22 | 15.41% | 1 | 22 | 0.14 |
| P04439 | HLA class I histocompatibility antigen, A-3 alpha chain | 571.74 | 34.52% | 1 | 172 | 0.152 |
| P28906 | Hematopoietic progenitor cell antigen CD34 | 24.64 | 2.08% | 1 | 3 | 0.187 |
| P01911 | HLA class II histocompatibility antigen, DRB1-15 beta chain | 347.41 | 44.36% | 2 | 55 | 0.205 |
| P57087 | Junctional adhesion molecule B | 51.04 | 3.69% | 1 | 2 | 0.209 |
| Q15109 | Advanced glycosylation end product-specific receptor | 283.25 | 23.76% | 6 | 47 | 0.21 |
| Q16602 | Calcitonin gene-related peptide type 1 receptor | 102.78 | 4.56% | 2 | 11 | 0.235 |
| P55087 | Aquaporin-4 | 106.77 | 6.19% | 2 | 16 | 0.238 |
| P29972 | Aquaporin-1 | 165.48 | 19.70% | 2 | 16 | 0.247 |
| Q9NY47 | Voltage-dependent calcium channel subunit alpha-2/delta-2 | 88.52 | 2.09% | 2 | 4 | 0.26 |
| Q03135 | Caveolin-1 | 404.38 | 61.80% | 10 | 129 | 0.281 |
| P37023 | Serine/threonine-protein kinase receptor R3 | 22.19 | 2.78% | 1 | 1 | 0.286 |
| Q96AP7 | Endothelial cell-selective adhesion molecule | 139.99 | 12.05% | 3 | 13 | 0.304 |
| P31645 | Sodium-dependent serotonin transporter | 52.21 | 2.54% | 1 | 4 | 0.313 |
| P56856 | Claudin-18 | 23.79 | 4.21% | 1 | 6 | 0.315 |
| P12429 | Annexin A3 | 881.28 | 58.51% | 19 | 259 | 0.322 |
| Q8NFJ5 | Retinoic acid-induced protein 3 | 97.17 | 5.32% | 2 | 9 | 0.329 |
| Q30154 | HLA class II histocompatibility antigen, DR beta 5 chain | 248.8 | 31.20% | 2 | 42 | 0.335 |
| P98172 | Ephrin-B1 | 50.37 | 5.20% | 1 | 1 | 0.343 |
| P02730 | Band 3 anion transport protein | 948.51 | 27.44% | 20 | 162 | 0.344 |
| Q96AM1 | Mas-related G-protein coupled receptor member F | 116.38 | 10.20% | 2 | 9 | 0.344 |
| P30486 | HLA class I histocompatibility antigen, B-48 alpha chain | 484.17 | 35.36% | 1 | 110 | 0.351 |
| P16671 | Platelet glycoprotein 4 | 325.47 | 19.92% | 8 | 60 | 0.355 |
| P50895 | Basal cell adhesion molecule | 468.48 | 27.07% | 12 | 40 | 0.358 |
| P07237 | Protein disulfide-isomerase | 1055.3 | 56.89% | 24 | 171 | 1.651 |
| P01597 | Ig kappa chain V-I region DEE | 104.49 | 22.22% | 1 | 28 | 1.662 |
| Q9Y666 | Solute carrier family 12 member 7 | 77.8 | 2.12% | 1 | 2 | 1.681 |
| O15427 | Monocarboxylate transporter 4 | 117.91 | 9.03% | 4 | 9 | 1.682 |
| P63241 | Eukaryotic translation initiation factor 5A-1 | 263.8 | 36.36% | 5 | 19 | 1.718 |
| Q96HE7 | ERO1-like protein alpha | 196.14 | 14.96% | 7 | 8 | 1.731 |
| Q96AG4 | Leucine-rich repeat-containing protein 59 | 206.06 | 28.66% | 7 | 10 | 1.784 |
| Q13509 | Tubulin beta-3 chain | 732.61 | 40.44% | 1 | 248 | 1.809 |
| P30453 | HLA class I histocompatibility antigen, A-34 alpha chain | 623.3 | 37.81% | 3 | 192 | 1.812 |
| P63244 | Guanine nucleotide-binding protein subunit beta-2-like 1 | 727.82 | 59.31% | 16 | 118 | 1.815 |
| P04433 | Ig kappa chain V-III region VG (Fragment) | 34.87 | 13.91% | 2 | 4 | 1.85 |
| P01877 | Ig alpha-2 chain C region | 498.16 | 55.59% | 3 | 82 | 1.874 |
| P17213 | Bactericidal permeability-increasing protein | 108.86 | 6.57% | 2 | 3 | 1.875 |
| Q14435 | Polypeptide N-acetylglucosaminyltransferase 3 | 25.84 | 1.58% | 1 | 1 | 1.881 |
| P11413 | Glucose-6-phosphate 1-dehydrogenase | 391.44 | 27.18% | 12 | 30 | 1.882 |
| P80723 | Brain acid soluble protein 1 | 372.69 | 70.93% | 10 | 32 | 1.91 |
| Q9BY50 | Signal peptidase complex catalytic subunit SEC11C | 140.79 | 27.60% | 5 | 7 | 1.933 |
| Q01650 | Large neutral amino acids transporter small subunit 1 | 37.08 | 3.55% | 1 | 2 | 1.948 |
| P01605 | Ig kappa chain V-I region Lay | 53.42 | 25.00% | 1 | 5 | 1.969 |
| Q9BYC5 | Alpha-(1,6)-fucosyltransferase | 83.78 | 4.52% | 2 | 5 | 2.063 |
| Q9HCY8 | Protein S100-A14 | 142.71 | 42.31% | 4 | 12 | 2.099 |
| O75976 | Carboxypeptidase D | 325.77 | 9.42% | 11 | 15 | 2.234 |
| Q99541 | Perilipin-2 | 28.53 | 2.52% | 1 | 1 | 2.46 |
| P09496 | Clathrin light chain A | 91.04 | 12.50% | 4 | 12 | 2.577 |
| P25815 | Protein S100-P | 83.62 | 24.21% | 2 | 15 | 2.932 |
PSMs: peptide spectrum matches.