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. 2014 Jun 11;30(12):i121–i129. doi: 10.1093/bioinformatics/btu277

Table 1.

Comparison of the LMH code's AUC performance on different methods

(a) AUCLMH_All
Tissue Method Low Medium High
Brain MLR 81.3 ± 0.1 72.4 ± 0.3 81.5 ± 0.1
BNN 89.2 ± 0.4 75.2 ± 0.3 88.0 ± 0.4
DNN 89.3 ± 0.5 79.4 ± 0.9 88.3 ± 0.6
Heart MLR 84.6 ± 0.1 73.1 ± 0.3 83.6 ± 0.1
BNN 91.1 ± 0.3 74.7 ± 0.3 89.5 ± 0.2
DNN 90.7 ± 0.6 79.7 ± 1.2 89.4 ± 1.1
Kidney MLR 86.7 ± 0.1 75.6 ± 0.2 86.3 ± 0.1
BNN 92.5 ± 0.4 78.3 ± 0.4 91.6 ± 0.4
DNN 91.9 ± 0.6 82.6 ± 1.1 91.2 ± 0.9
Liver MLR 86.5 ± 0.2 75.6 ± 0.2 86.5 ± 0.1
BNN 92.7 ± 0.3 77.9 ± 0.6 92.3 ± 0.5
DNN 92.2 ± 0.5 80.5 ± 1.0 91.1 ± 0.8
Testis MLR 85.6 ± 0.1 72.3 ± 0.4 85.2 ± 0.1
BNN 91.1 ± 0.3 75.5 ± 0.6 90.4 ± 0.3
DNN 90.7 ± 0.6 76.6 ± 0.7 89.7 ± 0.7
(b) AUCLMH_TV
Tissue Method Low Medium High
Brain MLR 71.1 ± 0.2 58.8 ± 0.2 70.8 ± 0.1
BNN 77.9 ± 0.5 61.1 ± 0.5 76.5 ± 0.7
DNN 82.8 ± 1.0 69.5 ± 1.1 81.1 ± 0.4
Heart MLR 73.9 ± 0.3 58.6 ± 0.4 72.7 ± 0.1
BNN 78.1 ± 0.3 58.9 ± 0.3 75.7 ± 0.3
DNN 82.0 ± 1.1 67.4 ± 1.3 79.7 ± 1.2
Kidney MLR 79.7 ± 0.3 64.3 ± 0.2 79.4 ± 0.2
BNN 83.9 ± 0.5 66.4 ± 0.5 83.3 ± 0.6
DNN 86.2 ± 0.6 73.2 ± 1.3 85.3 ± 1.2
Liver MLR 80.1 ± 0.5 63.7 ± 0.3 79.4 ± 0.3
BNN 84.9 ± 0.7 65.4 ± 0.7 84.4 ± 0.7
DNN 87.7 ± 0.6 69.4 ± 1.2 84.8 ± 0.8
Testis MLR 77.3 ± 0.2 60.8 ± 0.3 77.0 ± 0.1
BNN 81.1 ± 0.5 63.9 ± 0.9 81.0 ± 0.5
DNN 84.6 ± 1.1 67.8 ± 0.9 83.5 ± 0.9

Notes: ± indicates 1 standard deviation; top performances are shown in bold.