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. 2014 Apr 29;13(6):2973–2985. doi: 10.1021/pr500120c

Table 2. Factor Analysis for Extracellular Metabolites.

  correlation coefficienta,b
  correlation coefficienta,b
metabolite PC1 PC2 metabolite PC1 PC2
4-aminohippurate 0.948 0.259 trehalose 0.502 0.380
uridine 0.947 0.281 serotonin 0.474 0.049
choline 0.947 0.257 urea 0.468 0.071
2-hydroxybutyrate 0.945 0.273 N6-acetyllysine 0.465 0.044
isopropanol 0.941 0.267 isobutyrate 0.464 –0.242
GTP 0.930 0.268 glutarate 0.449 –0.258
5-hydroxyindole-3-acetate 0.894 0.292 asparagine –0.446 0.832
isocaproate 0.892 0.206 alanine –0.445 0.849
cysteine 0.890 0.288 nicotinurate 0.442 0.766
NADH 0.887 0.302 glycerol –0.438 0.828
dimethylamine 0.882 0.274 threonine –0.437 0.742
2′-deoxyinosine 0.881 0.265 O-phosphocholine 0.434 0.021
citrate 0.880 0.156 sn-glycero-3-phosphocholine 0.432 0.070
glycine 0.878 0.067 propylene glycol –0.422 0.057
ethanolamine 0.874 0.296 2-hydroxyisobutyrate –0.418 0.789
putrescine 0.865 0.225 serine –0.396 0.705
AMP 0.863 0.081 lysine 0.387 0.832
2-aminobutyrate 0.845 0.198 thymine 0.381 –0.523
NADP+ 0.824 0.206 leucine –0.374 0.862
NADPH 0.818 0.276 glutamine –0.349 0.677
sucrose 0.817 0.299 proline –0.346 0.672
O-phosphoethanolamine 0.816 0.291 4-hydroxyphenyllactate 0.337 –0.437
arginine 0.803 0.038 aspartate –0.326 0.879
nicotinate –0.803 0.150 riboflavin –0.307 0.740
creatinine 0.801 0.226 anserine –0.249 0.539
methanol 0.797 0.252 phenylalanine –0.238 0.753
myo-inositol 0.792 0.273 hypoxanthine –0.229 0.503
O-acetylcholine 0.788 –0.027 tryptophan 0.221 0.701
carnitine 0.781 0.237 cystine –0.210 –0.632
butyrate 0.780 0.264 glycerate –0.205 –0.680
ethanol 0.748 0.186 phenylacetate –0.203 –0.636
5-hydroxytryptophan –0.739 0.603 N-acetylglucosamine –0.202 –0.578
N-acetylserotonin 0.723 0.124 homocysteine –0.200 –0.591
4-aminobutyrate –0.723 0.552 2′-deoxyadenosine –0.199 0.757
trimethylamine N-oxide 0.719 0.277 uracil –0.196 -0.540
ATP 0.710 0.276 carnosine –0.190 –0.543
oxypurinol 0.698 0.262 cystathionine –0.184 –0.493
urocanate –0.692 0.000 malonate –0.182 –0.479
gluconate 0.685 0.134 maleate 0.116 0.911
betaine –0.675 0.561 isovalerate –0.114 –0.666
methionine –0.674 0.552 S-adenosylhomocysteine –0.110 0.829
creatine phosphate 0.669 0.160 valine –0.107 0.516
glutathione 0.662 0.014 pyroglutamate –0.096 0.931
sarcosine 0.661 0.071 biotin –0.086 –0.463
glutamate 0.655 –0.026 2-phenylpropionate –0.086 –0.463
pyridoxine –0.652 0.627 galactose –0.086 –0.463
pyruvate –0.648 0.656 3-hydroxybutyrate –0.086 –0.463
ornithine 0.643 0.113 4-pyridoxate –0.086 –0.463
lactate 0.643 0.119 UDP-N-acetylglucosamine –0.086 –0.463
succinate 0.633 0.122 2-hydroxy-3-methylvalerate –0.086 –0.463
tyrosine –0.623 0.266 3-aminoisobutyrate –0.086 –0.463
ADP 0.607 0.067 mannose –0.086 –0.463
O-phosphoserine –0.598 0.667 nicotinic acid adenine dinucleotide –0.086 –0.463
acetoin –0.575 0.672 xanthosine –0.086 –0.463
N-acetyltyrosine 0.560 0.055 6-hydroxynicotinate –0.086 –0.463
melatonin 0.559 0.083 cholate –0.086 –0.463
3-methylxanthine 0.551 0.209 galactitol –0.086 –0.463
methylsuccinate 0.544 –0.029 trans-4-hydroxy-l-proline –0.086 –0.463
isoleucine –0.544 0.719 glucose –0.070 0.733
histidine –0.530 0.595 3-hydroxyisovalerate 0.033 –0.618
t-methylhistidine –0.529 0.731 adenosine 0.020 0.673
percent total variance       30.37% 21.73%
cumulative percent variance         52.10%
a

Significance of correlation coefficient set at threshold of 0.4.

b

Correlation coefficient numbers in bold indicate metabolites for which the statistical relatedness of the variable is most correlated to the PC as indicated by the square of the cosine.