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. Author manuscript; available in PMC: 2015 Mar 12.
Published in final edited form as: Cell Host Microbe. 2014 Mar 12;15(3):382–392. doi: 10.1016/j.chom.2014.02.005

Figure 3. Comparative genomics of CD biomarkers.

Figure 3

The KEGG metabolic pathways that differentiate the species by behavior in disease state are shown as a heatmap. A selection of reference genomes that are representative for the species increased or decreased with disease were obtained from IMG (JGI), and biomarker detection was performed on their gene content at the level of KEGG pathways. Several were statistically significant (Wilcoxon, p < 10e-8) and are visualized here. Related to Table S2.