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. 2014 May 19;15(1):384. doi: 10.1186/1471-2164-15-384

Table 4.

Number of ORFs coding for potential upper (ring activation) and lower (ring cleavage) pathway enzymes in strains PP1Y and F199

Novosphingobium sp. PP1Y Novosphingobium aromaticivorans F199
Ring hydroxylating dioxygenases 38a 27
Membrane-bound monooxygenases 2 1
Molybdopteryn-dependent monooxygenases 5 3
Flavine monooxygenases 19 n.d.
2-oxoglutarate-dependent oxygenases (taurine-dioxygenase like) 1 0
2-oxoglutarate-dependent oxygenases 2 1
Extradiol ring-cleavage dioxygenases 10a 6
Protocatechuate 4,5 dioxygenases (estradiol ring-cleavage) 4 3

n.d., not determined.

aFour ORFs coding for ring hydroxylating dioxygenases and 3 ORFs coding for extradiol ring-cleavage dioxygenases are duplicated, therefore, the genome of PP1Y codes for 34 potential ring hydroxylating dioxygenases and 7 potential extradiol ring-cleavage dioxygenases.