Table 4.
Number of ORFs coding for potential upper (ring activation) and lower (ring cleavage) pathway enzymes in strains PP1Y and F199
Novosphingobium sp. PP1Y | Novosphingobium aromaticivorans F199 | |
---|---|---|
Ring hydroxylating dioxygenases | 38a | 27 |
Membrane-bound monooxygenases | 2 | 1 |
Molybdopteryn-dependent monooxygenases | 5 | 3 |
Flavine monooxygenases | 19 | n.d. |
2-oxoglutarate-dependent oxygenases (taurine-dioxygenase like) | 1 | 0 |
2-oxoglutarate-dependent oxygenases | 2 | 1 |
Extradiol ring-cleavage dioxygenases | 10a | 6 |
Protocatechuate 4,5 dioxygenases (estradiol ring-cleavage) | 4 | 3 |
n.d., not determined.
aFour ORFs coding for ring hydroxylating dioxygenases and 3 ORFs coding for extradiol ring-cleavage dioxygenases are duplicated, therefore, the genome of PP1Y codes for 34 potential ring hydroxylating dioxygenases and 7 potential extradiol ring-cleavage dioxygenases.