The spatial relationships and colocalization of neurotransmitter marker genes were characterized by image registration and double RNA in situ hybridization in 3-day-old
Platynereis larvae. (
A–
D and
F–
I) Average expression patterns of neurotransmitter marker genes and
r-opsin1 projected onto a common whole-body nuclear reference template. An average acetylated tubulin signal (white) was also projected onto the reference. Colocalization of registered genes in the average gene expression 3D image stacks is indicated by white and highlighted by dashed circles. (
E) Double whole mount RNA in situ hybridization for
hdc (cyan) and
r-opsin-1 (red) counterstained with acetylated tubulin antibody (white). All images are anterior views. Scale bar 50 µM. Average 3D image stacks are available in
Randel et al. (2014).