Table 1.
Method |
Egg sieving DNA extraction |
DNA-fishing extraction |
||
---|---|---|---|---|
No. +ve/no. examined | Percentage detected [95% CI] | No. +ve/no. examined | Percentage detected [95% CI] | |
Taq-PCR |
24/24 |
100% [86.2-100] |
22/24 |
91.7% [74.2-97.7] |
EVA-PCR |
21/24 |
87.5% [70.0-95.7] |
21/24 |
87.5% [68.9-95.7] |
mPCR |
24/24 |
100% [86.2-100] |
20/24 |
83.3% [64.1-93.3] |
CO1rtPCR | 23/24 | 95.8% [79.7-99.2] | Not examined |
A summary of the results of the molecular analysis of pure E. multilocularis egg samples using two different DNA extraction methods (egg sieving and DNA-fishing) and subsequent analysis with up to four different PCR methods (Taq-PCR, EVA-PCR, mPCR and CO1rtPCR. Three replicates were run for all methods except for EVA-PCR which was run only once due to limited material. A sample was categorised as being positive if either of the replicates produced a positive result. Egg numbers added to each sample are available in Additional file 1: Table S1.