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. 2014 Jun 17;9(6):e99844. doi: 10.1371/journal.pone.0099844

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© 2014 de Boer et al

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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MACS was used to call peaks (only chromosome 1) using the p300(1) dataset. Heart Input-seq data or a simulated uniform background dataset were used as input control. The influence of the input control set on peak-calling performance was measured using overlap with DHSs as outlined in the legend of Figure 8.