Table 1. Assembly summary of C. amada and Z. officinale.
C. amada | Z. officinale | |
Total nucleotides (Nt) | 6432754842 | 4869711364 |
Total number of clean reads | 56090429 | 42386900 |
Q20 percentage | 88.07 | 87.91 |
GC precentage | 47 | 47 |
Total number of reads after PCR duplicates | 26387032 | 22268804 |
Number of contigs | 36359 | 32312 |
Maximum contig length | 13664 | 12817 |
Minimum contig length | 300 | 300 |
Total contig length (bases) | 27331488 | 25350555 |
Mean contig length | 752 | 785 |
N75 | 536 | 570 |
N50 | 872 | 943 |
N25 | 1453 | 1481 |