Table 2. Summary of genes with high expression levels in response to R. solanacearum in C. amada, listed according to function.

Gene family	Up-regulated* in C. amada
Defense related	10
R-gene	2
Response to bacterium	6
Oxidative stress	7
Oxidation reduction	44
Jasmonic acid signaling	5
Ethylene signaling	1

*Fold-change between C. amada and Z. officinale, using fold-regulation cutoff of >3.0, P<0.005, FDR P at 0.05%.