Table 7. Digital DDH similarities between P. inhibens T5T and the other Phaeobacter and Leisingera species (including the genome-sequenced type strains and P. inhibens strains DSM 17395 and DSM 24588 [2,10]) calculated in silico with the GGDC server version 2.0 [83]†.
| Reference strain (type strain unless indicated) | formula 1 | formula 2 | formula 3 |
|---|---|---|---|
| P. arcticus DSM 23566T (AXBF00000000) | 17.60±3.30 | 21.70±2.44 | 17.80±2.95 |
| P. caeruleus DSM 24564T (AXBI00000000) | 19.00±3.36 | 20.60±2.46 | 19.10±2.99 |
| P. daeponensis DSM 23529T (AXBD00000000) | 20.40±3.41 | 22.60±2.46 | 20.20±3.03 |
| P. gallaeciensis CIP 105210T (AOQA01000000) | 78.40±3.76 | 36.20±2.57 | 68.50±3.52 |
| P. inhibens DSM 17395 (CP002976, CP002977, CP002978, CP002979) | 90.60±2.78 | 78.50±2.98 | 90.90±2.49 |
| P. inhibens DSM 24588 (2.10) (CP002972, CP002973, CP002974, CP002975) | 94.50±2.03 | 78.40±2.98 | 94.20±1.92 |
| L. aquimarina DSM 24565T (AXBE00000000) | 18.50±3.34 | 22.50±2.45 | 18.70±2.98 |
| L. methylohalidivorans DSM 14336T (CP006773, CP006774, CP006775) | 19.40±3.38 | 22.50±2.45 | 19.40±3.01 |
| L. nanhaiensis DSM 24252T (AXBG00000000) | 14.00±3.08 | 21.00±2.42 | 14.70±2.78 |
†The standard deviations indicate the inherent uncertainty in estimating DDH values from intergenomic distances based on models derived from empirical test data sets (which are always limited in size); see [83] for details. The distance formulas are explained in [82]; formula 2 is recommended, particularly for draft genomes (such as AOQA01000000). The numbers in parentheses are GenBank accession numbers identifying the underlying genome sequences.