Table 3.
Accession number(s)* | ||||
---|---|---|---|---|
Isolate†† | Core/E1 | NS5B | Reference(s) | |
Genotype 1 | ||||
1d | HC1-N15, HC1-N16 | L39299, L39302 | L38377, L38372 | 66 |
1f | FR2 | L38350 | L38371 | 66 |
1i | FR16, QC77 | n.a., AY434119 | L48495, AY434120 | 67,68 |
1j | QC2, QC89 | AY434158, AY434128 | AY434106, AY434129 | 67 |
1k | QC68, QC82 | AY434112, AY434122 | AY434113, AY434123 | 67 |
Genotype 2 | ||||
2f | JK081, JK139 | D49754, D49757 | D49769, D49777 | 47 |
2g | MED017 | n.a. | X93323 | 69 |
2h | MED007 | n.a. | X93327 | 69 |
2l | FR15 | n.a. | L48494 | 68 |
2n | NL50 | L39309 | L44602 | 66 |
2o | FR4 | L38333 | L38373 | 66 |
2p | NL33 | L39300 | L44601 | 66 |
Genotype 3 | ||||
3c | NE048 | D16612 | D14198/D16613 | 70 |
3d | NE274 | D16620 | D14200/D16621 | 70 |
3e | NE145 | D16618 | D16619 | 70 |
3f | NE125, PK64 | D16614, n.a. | D14203/D16615, L78842 | 70,71 |
Genotype 4 | ||||
4e | CAM600, GB809 | L29589, L29629 | L29590, L29626 | 72 |
4h | GB438, FrSSD35 | L29610, n.a. | L29611, AJ291249 | 72,73 |
4i | CAR4/1205 | L36439 | L36437 | 74 |
4j | CAR1/501 | n.a. | L36438 | 74 |
Accession numbers of sequences from the core/E1 and NS5B regions. “n.a.”: not available; “/”: denotes that the core/E1 or NS5B sequences are available from two different accession numbers.
Examples of each provisionally assigned HCV.