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. 2013 Dec 20;59(1):318–327. doi: 10.1002/hep.26744

Table 3.

Remaining Provisionally Assigned HCV Subtypes

Accession number(s)*

Isolate Core/E1 NS5B Reference(s)
Genotype 1
1d HC1-N15, HC1-N16 L39299, L39302 L38377, L38372 66
1f FR2 L38350 L38371 66
1i FR16, QC77 n.a., AY434119 L48495, AY434120 67,68
1j QC2, QC89 AY434158, AY434128 AY434106, AY434129 67
1k QC68, QC82 AY434112, AY434122 AY434113, AY434123 67
Genotype 2
2f JK081, JK139 D49754, D49757 D49769, D49777 47
2g MED017 n.a. X93323 69
2h MED007 n.a. X93327 69
2l FR15 n.a. L48494 68
2n NL50 L39309 L44602 66
2o FR4 L38333 L38373 66
2p NL33 L39300 L44601 66
Genotype 3
3c NE048 D16612 D14198/D16613 70
3d NE274 D16620 D14200/D16621 70
3e NE145 D16618 D16619 70
3f NE125, PK64 D16614, n.a. D14203/D16615, L78842 70,71
Genotype 4
4e CAM600, GB809 L29589, L29629 L29590, L29626 72
4h GB438, FrSSD35 L29610, n.a. L29611, AJ291249 72,73
4i CAR4/1205 L36439 L36437 74
4j CAR1/501 n.a. L36438 74
*

Accession numbers of sequences from the core/E1 and NS5B regions. “n.a.”: not available; “/”: denotes that the core/E1 or NS5B sequences are available from two different accession numbers.

Examples of each provisionally assigned HCV.