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. 2014 Feb 13;9(5):774–782. doi: 10.4161/epi.28153

Table 4. Gene set analysis of the association of arsenic exposure and DNA methylation changes on biological pathways from the Kyoto Encyclopedia of Genes and Genomes (KEGG).

    Blood (unadjusted) Blood (WBC-Adjusted)
    mean F max F mean F max F
EWAS Entire 450K Array 0.004 <0.001 0.06 < 0.001
Any Kegg Any CpG mapped to any gene in a KEGG pathway 0.001 <0.001 0.066 0.075
Any Gene Any CpG mapped to any gene 0.001 <0.001 0.065 0.082
hsa04950 Maturity onset diabetes of the young 0.001 <0.001 0.014 0.054
hsa04640 Hematopoietic cell lineage <0.001 <0.001 0.023 0.023
hsa04614 Renin-angiotensin system <0.001 <0.001 0.024 0.002
hsa04514 Cell adhesion molecules (CAMs) <0.001 <0.001 0.028 0.036
hsa05412 Arrhythmogenic right ventricular cardiomyopathy (ARVC) <0.001 <0.001 0.027 0.029
hsa04612 Antigen processing and presentation <0.001 0.01 0.053 0.036
hsa04350 TGF-β signaling pathway <0.001 <0.001 0.039 0.005
hsa05410 Hypertrophic cardiomyopathy (HCM) <0.001 <0.001 0.04 0.023
hsa04020 Calcium signaling pathway <0.001 <0.001 0.042 0.012
hsa05414 Dilated cardiomyopathy <0.001 <0.001 0.05 0.024
hsa05218 Melanoma <0.001 0.002 0.053 0.283
hsa04320 Dorso-ventral axis formation <0.001 <0.001 0.036 0.02
hsa04920 Adipocytokine signaling pathway <0.001 <0.001 0.05 0.026
hsa05200 Pathways in cancer <0.001 <0.001 0.054 0.097
hsa04512 ECM-receptor interaction <0.001 <0.001 0.077 0.007
hsa04670 Leukocyte transendothelial migration <0.001 <0.001 0.054 0.013
hsa04810 Regulation of actin cytoskeleton <0.001 <0.001 0.063 0.038
hsa04914 Progesterone-mediated oocyte maturation 0.001 0.001 0.054 0.039
hsa04650 Natural killer cell mediated cytotoxicity <0.001 <0.001 0.060 0.005
hsa03320 PPAR signaling pathway <0.001 <0.001 0.057 0.026
hsa04150 mTOR signaling pathway 0.001 0.003 0.062 0.004
hsa04510 Focal adhesion <0.001 <0.001 0.083 0.016
hsa04520 Adherens junction 0.001 <0.001 0.051 0.135
hsa04330 Notch signaling pathway <0.001 0.002 0.07 0.048