Table 6.
Comparison of bootstrap 95% percentile confidence interval of average F-measure between the minimum energy structures and the maximum accuracy structures of the HK-PK and the HK-PK-free data sets
| Input structures | Min energy | Max accuracy | Permutation test |
|---|---|---|---|
| Iter. HFold - hotspots PKed |
(72.83, 83.37) |
(78.56, 87.05) |
Not significant |
| Iter. HFold - hotspots PK-free |
(74.93, 80.26) |
(87.70, 90.57) |
Significant |
| Iter. HFold - 50 suboptimals PKed |
(67.70, 79.57) |
(80.41, 88.14) |
Significant |
| Iter. HFold - 50 suboptimals PK-free |
(76.27, 81.46) |
(90.05, 93.00) |
Significant |
| HotKnots PKed |
(73.60, 83.35) |
(84.50, 91.48) |
Significant |
| HotKnots PK-free | (76.74, 81.95) | (88.32, 91.08) | Significant |