Table 3.
Identified Proteins Common to MDM- and T-cell Derived HIV-1 Virions
| gene name | gene symbol | % of sequence coverage |
no. of unique peptides |
no. of unique spectra |
|---|---|---|---|---|
| 2′,3′-cyclic-nucleotide 3′-phosphodiesterase |
CNP | 11.17 | 5 | 7 |
| 6-phosphogluconate dehydrogenase, decarboxylating |
Pgd | 9.94 | 3 | 5 |
| Actin (37 isoforms) | act1 | 12 | 827 | 8432 |
| Alpha-1-antiproteinase | SERPINA1 | 32.22 | 17 | 38 |
| Alpha-2-H | AHSG | 25.35 | 9 | 16 |
| Annexin A2 | ANXA2 | 52.22 | 21 | 62 |
| CD44 antigen | CD44 | 7.28 | 4 | 14 |
| Cell division control protein 42 homologue |
CDC42 | 36.65 | 6 | 26 |
| EH domain-containing protein 4 |
EHD4 | 24.59 | 9 | 12 |
| Elongation factor 1- alpha (4 isoforms) |
eFF1a | 10.9 | 6 | 78 |
| Ezrin | EZR | 18.44 | 9 | 23 |
| Heat shock 70 kDa protein (11 isoforms) |
HSPA | 15.78 | 132 | 516 |
| Heat shock cognate 71 kDa protein |
HSPA8 | 39.63 | 26 | 126 |
| Heat shock protein H | HSP90AB1 | 24.45 | 15 | 52 |
| Hemoglobin fetal subunit beta |
60.69 | 10 | 101 | |
| Hemoglobin subunit beta (3 isoforms) |
HBB | 27.9 | 4 | 18 |
| HLA A (MHC class I) | HLA-C | 19.13 | 10 | 39 |
| HLA DR (MHC class II) (3 isoforms) |
HLA-DRB1 | 21.06 | 5 | 28 |
| Moesin | MSN | 23.4 | 15 | 70 |
| P (Ankyrin Repeat Containing) |
POTEE | 10.33 | 16 | 168 |
| Peptidyl-prolyl cis– trans isomerase A (cyclophilin A) |
PPIA | 56.37 | 14 | 103 |
| Phosphoglycerate kinase 1 |
PGK1 | 32.86 | 12 | 22 |
| Pyruvate kinase isozymes M1/M2 |
PKM2 | 40.12 | 16 | 40 |
| Ras-related C3 botulinum toxin substrate 2 |
Rac2 | 30.73 | 6 | 7 |
| Syntenin-1 | SDCBP | 10.2 | 7 | 9 |
| Ubiquitin (Fragment) | 39.69 | 4 | 27 |