Table 2.
Protein composition in the myrtle rust genome.
| Contig set l ≥ 3000 bp |
Contig set l ≥ 4000 bp |
|||
|---|---|---|---|---|
| Proteins | # of contigs | % | # of contigs | % |
| Total # of contigs | 37,605 | 23,106 | ||
| No blastx hits | 17,714 | 47.0 | 9150 | 39.6 |
| Mapped proteins | 6800 | 18.1 | 4932 | 21.3 |
| Blast2GO annotated proteins | 2907 | 7.7 | 2032 | 8.8 |
| Mitochondrial contigs | 79 | 0.21 | 65 | 0.28 |
| Hypothetical proteins | 10,105 | 26.9 | 6927 | 30 |
| -[Uncharacterized protein | [21 | [0.1 | [16 | [0.1 |
| hypothetical protein 1PGTG_XXXXX | 8803 | 23.4 | 5994 | 25.9 |
| hypothetical protein | 704 | 1.9 | 496 | 2.1 |
| 2MELLADRAFT_XXXXX | 19 | 0.1 | 17 | 0.1 |
| hypothetical protein | 30 | 0.1 | 20 | 0.1 |
| 3TREMEDRAFT XXXXX | 8] | 0] | 7] | 0] |
| hypothetical protein 4MPER_XXXXX Others] | ||||
Notes: [] indicates the breakdown of hypothetical protein.
1
PGTG_XXXXX: hypothetical protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3].
2
MELLADRAFT_XXXXX: hypothetical protein [Melampsora larici-populina 98AG31].
3
TREMEDRAFT_XXXXX: hypothetical protein [Tremella mesenterica DSM 1558].
4
MPER_XXXXX: hypothetical protein [Moniliophthora perniciosa FA553].