Table 3.
Results of MSP-9 secondary protein structure (H: helix, E: extended sheet, L: loop) and solvent accessibility prediction (e: exposed residues, b: buried residues). In bold are labeled the most common amino acids.
| Species | Secondary structure (% in protein) | Solvent accessibility (% in protein) | aa composition (% of residues) | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| H | E | L | b | E | |||||||||||
| P. falciparum | 81.73 | 1.49 | 16.78 | 24.63 | 75.37 | A: 2.8 | C: 0.8 | D: 6.9 | E: 14.6 | F: 2.6 | G: 3.0 | H: 1.1 | I: 5.5 | K: 14.5 | L: 8.7 |
| M: 3.0 | N: 12.9 | P: 2.4 | Q: 4.1 | R: 0.5 | S: 3.9 | T: 4.2 | V: 5.4 | W: 0.1 | Y: 3.0 | ||||||
|
| |||||||||||||||
| P. yoelii | 31.27 | 6.64 | 62.09 | 28.17 | 71.83 | A: 2.8 | C: 0.9 | D: 8.8 | E: 10.8 | F: 1.5 | G: 4.6 | H: 0.7 | I: 9.4 | K: 9.9 | L: 9.0 |
| M: 1.5 | N: 8.7 | P: 3.4 | Q: 2.2 | R: 1.9 | S: 9.9 | T: 5.6 | V: 5.2 | W: 0.0 | Y: 3.2 | ||||||
|
| |||||||||||||||
| P. coatneyi | 20.29 | 2.36 | 77.36 | 15.71 | 84.29 | A: 4.2 | C: 0.5 | D: 6.8 | E: 12.7 | R: 0.8 | G: 5.5 | H: 2.9 | I: 6.4 | K: 9.9 | L: 7.3 |
| M: 2.5 | N: 6.2 | P: 2.1 | Q: 6.9 | S:5.1 | T: 8.4 | V: 8.0 | W: 0.0 | Y: 1.8 | |||||||
|
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| P. knowlesi | 14.12 | 3.42 | 82.45 | 18.54 | 81.46 | A: 2.4 | C: 0.7 | D: 5.3 | E: 15.1 | F: 2.3 | G: 6.0 | H: 2.1 | I: 6.7 | K: 12.3 | L: 8.0 |
| M: 3.0 | N: 6.1 | P: 3.0 | Q: 5.6 | R: 0.4 | S: 3.3 | T: 8.4 | V: 7.1 | W: 0.0 | Y: 2.1 | ||||||
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| P. cynomolgi | 14.71 | 2.7 | 82.6 | 15.44 | 84.56 | A: 9.1 | C: 0.5 | D: 7.0 | E: 15.9 | F: 2.5 | G: 5.0 | H: 2.0 | I: 5.4 | K: 8.3 | L: 6.1 |
| M: 2.8 | N: 7.0 | P: 3.7 | Q: 2.6 | R: 0.9 | S: 3.2 | T: 5.5 | V: 11 | W: 0.0 | Y: 1.6 | ||||||
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| P. vivax | 23.14 | 5.57 | 71.29 | 22.6 | 77.4 | A: 10.4 | C: 0.4 | D: 6.1 | E: 17.1 | F: 2.1 | G: 4.3 | H: 2.6 | I: 4.2 | K: 7.4 | L: 5.6 |
| M: 2.2 | N: 5.8 | P: 3.9 | Q: 2.3 | R: 0.6 | S: 3.1 | T: 6.9 | V: 13.5 | W: 0.0 | Y: 1.6 | ||||||