Table 1. Unique Autolytic Cuts in the N-Terminal Domain Observed by Mass Spectrometrya.
no.
of unique cuts |
weighted
frequency |
||||
---|---|---|---|---|---|
type (P1) | total no. in the N-domain | incubation for 3 h at 37 °C with 5 mM DTT | incubation for 20 h at 37 °C with 5 mM DTT | incubation for 3 h at 37 °C with 5 mM DTT | incubation for 20 h at 37 °C with 5 mM DTT |
C | 16 | 6 | 7 | 0.38 | 0.44 |
A | 19 | 6 | 4 | 0.32 | 0.21 |
L | 8 | 4 | 2 | 0.50 | 0.25 |
Q | 7 | 2 | 2 | 0.28 | 0.29 |
R | 13 | 2 | 2 | 0.15 | 0.15 |
T | 2 | 1 | 1 | 0.50 | 0.50 |
V | 9 | 1 | 1 | 0.11 | 0.11 |
The position of each autolytic cut was identified by analysis of the generated peptides, and the unique cuts refer to the P1 residue type, looking exclusively at the N-domain (residues 30–157). The weighted frequency = (the number of unique cuts)/(total number in the N-domain).