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. 2014 May 6;289(25):17767–17779. doi: 10.1074/jbc.M114.556266

TABLE 2.

Ionic strength dependence of association rate constant of F425 B4a1, b12, and Ab21 for binding to distinct variants of gp120

Values of association rate constant ka were obtained by global analyses of sensorograms generated after injection of serial 2-fold dilutions of F425 B4a1 (25 to 0.049 nm), b12 (0.0049 (0.019)–5 nm, for binding to gp120 BaL, JRCSF, and CN54; 0.0049 (0.039)–10 nm, for binding to gp120 92RW020; and 0.039–20 nm, for binding to gp120 96ZM651), and of heme-exposed Ab21 (125 to 0.488 (0.244) nm) onto sensor chips with immobilized variants of gp120. The interactions were studied in HBS-EP buffer containing different concentration of NaCl, 0.05, 0.15, and 0.45 m. The global analyses were performed by fitting experimental data by using Langmuir binding with a drifting baseline kinetic model. In case of b12 binding to gp120 BaL, JRCSF, and CN54, at 0.05 m NaCl, due to possible involvement of mass transport, the experimental data were fitted by using Langmuir binding kinetic model with correction for mass transport artifacts. The values presented are mean ± S.D. of three independent fits of the experimental data.

F425 B4a1
b12
Ab21-heme
0.05 m NaCl 0.15 m 0. 45 m 0.05 m NaCl 0.15 m 0. 45 m 0.05 m NaCl 0.15 m 0.45 m
ka ×105m1 s1 (mean ± S.D.)
92RW020 2.5 ± 0.006 2.05 ± 0.01 1.47 ±0.006 57.3 ± 2.2 12.2 ± 0.001 4.6 ± 0.47 1.12 ± 0.021 0.99 ± 0.014 0.92 ± 0.012
BaL 4.05 ± 0.1 4.1 ± 0.069 2.01 ± 0.023 477 ± 4.6 15.2 ± 0.001 7.58 ± 0 0.98 ± 0.02 0.97 ± 0.012 0.49 ± 0.009
JRCSF 3.14 ± 0.023 3.19 ± 0.026 1.79 ± 0.011 150 ± 4.2 15.5 ± 0.01 6.22 ± 0.9 1.38 ± 0.023 0.9 ± 0.008 0.92 ± 0.018
CN54 3.21 ± 0.021 3.04 ± 0.055 1.91 ± 0.01 600 ± 5.7 6.44 ± 0.6 4.17 ± 0.1 0.62 ± 0.014 0.77 ± 0.017 0.36 ± 0.003
96ZM651 1.1 ± 0.006 0.56 ± 0.026 0.28 ± 0.13 50 ± 1.2 5.16 ± 0.38 # 1.1 ± 0.006 1.26 ± 0 1.04 ± 0.02
93TH975 # # # 0.24 ± 0.04 # # 0.78 ± 0.03 0.68 ± 0.008 0.48 ± 0.02